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F6Z0J8

- F6Z0J8_ORNAN

UniProt

F6Z0J8 - F6Z0J8_ORNAN

Protein
Submitted name:

Uncharacterized protein

Gene

ODC1

Organism
Ornithorhynchus anatinus (Duckbill platypus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ornithine decarboxylase activity Source: Ensembl

    GO - Biological processi

    1. kidney development Source: Ensembl
    2. polyamine biosynthetic process Source: UniProtKB-KW
    3. positive regulation of cell proliferation Source: Ensembl
    4. response to virus Source: Ensembl

    Keywords - Biological processi

    Polyamine biosynthesisUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:ODC1Imported
    OrganismiOrnithorhynchus anatinus (Duckbill platypus)Imported
    Taxonomic identifieri9258 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMonotremataOrnithorhynchidaeOrnithorhynchus
    ProteomesiUP000002279: Unplaced

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: Ensembl

    Structurei

    3D structure databases

    ProteinModelPortaliF6Z0J8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Orn/Lys/Arg decarboxylase class-II family.UniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00390000011560.
    KOiK01581.
    OMAiTIHYVMS.
    OrthoDBiEOG73Z2T6.
    TreeFamiTF300760.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    InterProiIPR009006. Ala_racemase/Decarboxylase_C.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR002433. Orn_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view]
    PRINTSiPR01179. ODADCRBXLASE.
    PR01182. ORNDCRBXLASE.
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    PROSITEiPS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6Z0J8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNNFSNDEFD FTFLDEGFTA KDILDQKINE VSSSDDKDAF YVADLGDVLK    50
    KHLRWYKALP RVTPFYAVKC NDSKAIVKTL AALGAGFDCA SKTEIQLVQS 100
    IGVSPERIIY ANPCKQVSQI KYAANSGVQM MTFDSEVELM KVNRAHPKAK 150
    LVLRIATDDS KAVCRLSVKF GATLKTSRLL LERAKELNID VIGVSFHVGS 200
    GCTDPDTFVQ AVTDARCVFD MGAELGFDMY LLDIGGGFPG SEDVKLKFEE 250
    ITSVINPALE KYFPSDSGVR IIAEPGRYYV ASAFTLAVNI IAKKVVLKEQ 300
    TGSDDEDDVN DKTIMYYVND GVYGSFNCIL YDHAHVKPIL QKRPKPDESY 350
    YSCSIWGPTC DGLDRIVERC DMPELQVGDW MLFENMGAYT VAAASTFNGF 400
    QRPTIYYVMS GPAWQRMQQI NERGFPAEVE EPENNTLPLS CAWESGMEHH 450
    PATCASASIN V 461
    Length:461
    Mass (Da):51,188
    Last modified:July 27, 2011 - v1
    Checksum:i8F13E93345037B7E
    GO

    Sequence databases

    RefSeqiXP_001513468.1. XM_001513418.3.

    Genome annotation databases

    EnsembliENSOANT00000003684; ENSOANP00000003683; ENSOANG00000002322.
    GeneIDi100093130.
    KEGGioaa:100093130.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_001513468.1. XM_001513418.3.

    3D structure databases

    ProteinModelPortali F6Z0J8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSOANT00000003684 ; ENSOANP00000003683 ; ENSOANG00000002322 .
    GeneIDi 100093130.
    KEGGi oaa:100093130.

    Organism-specific databases

    CTDi 4953.

    Phylogenomic databases

    GeneTreei ENSGT00390000011560.
    KOi K01581.
    OMAi TIHYVMS.
    OrthoDBi EOG73Z2T6.
    TreeFami TF300760.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    InterProi IPR009006. Ala_racemase/Decarboxylase_C.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR002433. Orn_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view ]
    PRINTSi PR01179. ODADCRBXLASE.
    PR01182. ORNDCRBXLASE.
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    PROSITEi PS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome analysis of the platypus reveals unique signatures of evolution."
      Warren W.C., Hillier L.W., Marshall Graves J.A., Birney E., Ponting C.P., Grutzner F., Belov K., Miller W., Clarke L., Chinwalla A.T., Yang S.P., Heger A., Locke D.P., Miethke P., Waters P.D., Veyrunes F., Fulton L., Fulton B.
      , Graves T., Wallis J., Puente X.S., Lopez-Otin C., Ordonez G.R., Eichler E.E., Chen L., Cheng Z., Deakin J.E., Alsop A., Thompson K., Kirby P., Papenfuss A.T., Wakefield M.J., Olender T., Lancet D., Huttley G.A., Smit A.F., Pask A., Temple-Smith P., Batzer M.A., Walker J.A., Konkel M.K., Harris R.S., Whittington C.M., Wong E.S., Gemmell N.J., Buschiazzo E., Vargas Jentzsch I.M., Merkel A., Schmitz J., Zemann A., Churakov G., Kriegs J.O., Brosius J., Murchison E.P., Sachidanandam R., Smith C., Hannon G.J., Tsend-Ayush E., McMillan D., Attenborough R., Rens W., Ferguson-Smith M., Lefevre C.M., Sharp J.A., Nicholas K.R., Ray D.A., Kube M., Reinhardt R., Pringle T.H., Taylor J., Jones R.C., Nixon B., Dacheux J.L., Niwa H., Sekita Y., Huang X., Stark A., Kheradpour P., Kellis M., Flicek P., Chen Y., Webber C., Hardison R., Nelson J., Hallsworth-Pepin K., Delehaunty K., Markovic C., Minx P., Feng Y., Kremitzki C., Mitreva M., Glasscock J., Wylie T., Wohldmann P., Thiru P., Nhan M.N., Pohl C.S., Smith S.M., Hou S., Nefedov M., de Jong P.J., Renfree M.B., Mardis E.R., Wilson R.K.
      Nature 453:175-183(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: GlennieImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: GlennieImported.

    Entry informationi

    Entry nameiF6Z0J8_ORNAN
    AccessioniPrimary (citable) accession number: F6Z0J8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3