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F6Z0J8

- F6Z0J8_ORNAN

UniProt

F6Z0J8 - F6Z0J8_ORNAN

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Protein
Submitted name: Uncharacterized protein
Gene
ODC1
Organism
Ornithorhynchus anatinus (Duckbill platypus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ornithine decarboxylase activity Source: Ensembl

GO - Biological processi

  1. kidney development Source: Ensembl
  2. polyamine biosynthetic process Source: UniProtKB-KW
  3. positive regulation of cell proliferation Source: Ensembl
  4. response to virus Source: Ensembl
Complete GO annotation...

Keywords - Biological processi

Polyamine biosynthesisUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ODC1Imported
OrganismiOrnithorhynchus anatinus (Duckbill platypus)Imported
Taxonomic identifieri9258 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMonotremataOrnithorhynchidaeOrnithorhynchus
ProteomesiUP000002279: Unplaced

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: Ensembl
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliF6Z0J8.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

GeneTreeiENSGT00390000011560.
KOiK01581.
OMAiTIHYVMS.
OrthoDBiEOG73Z2T6.
TreeFamiTF300760.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSiPR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
PROSITEiPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6Z0J8-1 [UniParc]FASTAAdd to Basket

« Hide

MNNFSNDEFD FTFLDEGFTA KDILDQKINE VSSSDDKDAF YVADLGDVLK    50
KHLRWYKALP RVTPFYAVKC NDSKAIVKTL AALGAGFDCA SKTEIQLVQS 100
IGVSPERIIY ANPCKQVSQI KYAANSGVQM MTFDSEVELM KVNRAHPKAK 150
LVLRIATDDS KAVCRLSVKF GATLKTSRLL LERAKELNID VIGVSFHVGS 200
GCTDPDTFVQ AVTDARCVFD MGAELGFDMY LLDIGGGFPG SEDVKLKFEE 250
ITSVINPALE KYFPSDSGVR IIAEPGRYYV ASAFTLAVNI IAKKVVLKEQ 300
TGSDDEDDVN DKTIMYYVND GVYGSFNCIL YDHAHVKPIL QKRPKPDESY 350
YSCSIWGPTC DGLDRIVERC DMPELQVGDW MLFENMGAYT VAAASTFNGF 400
QRPTIYYVMS GPAWQRMQQI NERGFPAEVE EPENNTLPLS CAWESGMEHH 450
PATCASASIN V 461
Length:461
Mass (Da):51,188
Last modified:July 27, 2011 - v1
Checksum:i8F13E93345037B7E
GO

Sequence databases

RefSeqiXP_001513468.1. XM_001513418.3.

Genome annotation databases

EnsembliENSOANT00000003684; ENSOANP00000003683; ENSOANG00000002322.
GeneIDi100093130.
KEGGioaa:100093130.

Cross-referencesi

Sequence databases

RefSeqi XP_001513468.1. XM_001513418.3.

3D structure databases

ProteinModelPortali F6Z0J8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSOANT00000003684 ; ENSOANP00000003683 ; ENSOANG00000002322 .
GeneIDi 100093130.
KEGGi oaa:100093130.

Organism-specific databases

CTDi 4953.

Phylogenomic databases

GeneTreei ENSGT00390000011560.
KOi K01581.
OMAi TIHYVMS.
OrthoDBi EOG73Z2T6.
TreeFami TF300760.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProi IPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view ]
PRINTSi PR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
PROSITEi PS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome analysis of the platypus reveals unique signatures of evolution."
    Warren W.C., Hillier L.W., Marshall Graves J.A., Birney E., Ponting C.P., Grutzner F., Belov K., Miller W., Clarke L., Chinwalla A.T., Yang S.P., Heger A., Locke D.P., Miethke P., Waters P.D., Veyrunes F., Fulton L., Fulton B.
    , Graves T., Wallis J., Puente X.S., Lopez-Otin C., Ordonez G.R., Eichler E.E., Chen L., Cheng Z., Deakin J.E., Alsop A., Thompson K., Kirby P., Papenfuss A.T., Wakefield M.J., Olender T., Lancet D., Huttley G.A., Smit A.F., Pask A., Temple-Smith P., Batzer M.A., Walker J.A., Konkel M.K., Harris R.S., Whittington C.M., Wong E.S., Gemmell N.J., Buschiazzo E., Vargas Jentzsch I.M., Merkel A., Schmitz J., Zemann A., Churakov G., Kriegs J.O., Brosius J., Murchison E.P., Sachidanandam R., Smith C., Hannon G.J., Tsend-Ayush E., McMillan D., Attenborough R., Rens W., Ferguson-Smith M., Lefevre C.M., Sharp J.A., Nicholas K.R., Ray D.A., Kube M., Reinhardt R., Pringle T.H., Taylor J., Jones R.C., Nixon B., Dacheux J.L., Niwa H., Sekita Y., Huang X., Stark A., Kheradpour P., Kellis M., Flicek P., Chen Y., Webber C., Hardison R., Nelson J., Hallsworth-Pepin K., Delehaunty K., Markovic C., Minx P., Feng Y., Kremitzki C., Mitreva M., Glasscock J., Wylie T., Wohldmann P., Thiru P., Nhan M.N., Pohl C.S., Smith S.M., Hou S., Nefedov M., de Jong P.J., Renfree M.B., Mardis E.R., Wilson R.K.
    Nature 453:175-183(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GlennieImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: GlennieImported.

Entry informationi

Entry nameiF6Z0J8_ORNAN
AccessioniPrimary (citable) accession number: F6Z0J8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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