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F6Z0J8 (F6Z0J8_ORNAN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. RuleBase RU003737

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSOANP00000003683

Sequences

Sequence LengthMass (Da)Tools
F6Z0J8 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 8F13E93345037B7E

FASTA46151,188
        10         20         30         40         50         60 
MNNFSNDEFD FTFLDEGFTA KDILDQKINE VSSSDDKDAF YVADLGDVLK KHLRWYKALP 

        70         80         90        100        110        120 
RVTPFYAVKC NDSKAIVKTL AALGAGFDCA SKTEIQLVQS IGVSPERIIY ANPCKQVSQI 

       130        140        150        160        170        180 
KYAANSGVQM MTFDSEVELM KVNRAHPKAK LVLRIATDDS KAVCRLSVKF GATLKTSRLL 

       190        200        210        220        230        240 
LERAKELNID VIGVSFHVGS GCTDPDTFVQ AVTDARCVFD MGAELGFDMY LLDIGGGFPG 

       250        260        270        280        290        300 
SEDVKLKFEE ITSVINPALE KYFPSDSGVR IIAEPGRYYV ASAFTLAVNI IAKKVVLKEQ 

       310        320        330        340        350        360 
TGSDDEDDVN DKTIMYYVND GVYGSFNCIL YDHAHVKPIL QKRPKPDESY YSCSIWGPTC 

       370        380        390        400        410        420 
DGLDRIVERC DMPELQVGDW MLFENMGAYT VAAASTFNGF QRPTIYYVMS GPAWQRMQQI 

       430        440        450        460 
NERGFPAEVE EPENNTLPLS CAWESGMEHH PATCASASIN V 

« Hide

References

« Hide 'large scale' references
[1]"Genome analysis of the platypus reveals unique signatures of evolution."
Warren W.C., Hillier L.W., Marshall Graves J.A., Birney E., Ponting C.P., Grutzner F., Belov K., Miller W., Clarke L., Chinwalla A.T., Yang S.P., Heger A., Locke D.P., Miethke P., Waters P.D., Veyrunes F., Fulton L., Fulton B. expand/collapse author list , Graves T., Wallis J., Puente X.S., Lopez-Otin C., Ordonez G.R., Eichler E.E., Chen L., Cheng Z., Deakin J.E., Alsop A., Thompson K., Kirby P., Papenfuss A.T., Wakefield M.J., Olender T., Lancet D., Huttley G.A., Smit A.F., Pask A., Temple-Smith P., Batzer M.A., Walker J.A., Konkel M.K., Harris R.S., Whittington C.M., Wong E.S., Gemmell N.J., Buschiazzo E., Vargas Jentzsch I.M., Merkel A., Schmitz J., Zemann A., Churakov G., Kriegs J.O., Brosius J., Murchison E.P., Sachidanandam R., Smith C., Hannon G.J., Tsend-Ayush E., McMillan D., Attenborough R., Rens W., Ferguson-Smith M., Lefevre C.M., Sharp J.A., Nicholas K.R., Ray D.A., Kube M., Reinhardt R., Pringle T.H., Taylor J., Jones R.C., Nixon B., Dacheux J.L., Niwa H., Sekita Y., Huang X., Stark A., Kheradpour P., Kellis M., Flicek P., Chen Y., Webber C., Hardison R., Nelson J., Hallsworth-Pepin K., Delehaunty K., Markovic C., Minx P., Feng Y., Kremitzki C., Mitreva M., Glasscock J., Wylie T., Wohldmann P., Thiru P., Nhan M.N., Pohl C.S., Smith S.M., Hou S., Nefedov M., de Jong P.J., Renfree M.B., Mardis E.R., Wilson R.K.
Nature 453:175-183(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Glennie Ensembl ENSOANP00000003683.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Glennie Ensembl ENSOANP00000003683.

Cross-references

Sequence databases

RefSeqXP_001513468.1. XM_001513418.2.

3D structure databases

ProteinModelPortalF6Z0J8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSOANT00000003684; ENSOANP00000003683; ENSOANG00000002322.
GeneID100093130.
KEGGoaa:100093130.

Organism-specific databases

CTD4953.

Phylogenomic databases

GeneTreeENSGT00390000011560.
KOK01581.
OMACDGLDCV.
OrthoDBEOG73Z2T6.
TreeFamTF300760.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
[Graphical view]
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSPR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMSSF50621. SSF50621. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6Z0J8_ORNAN
AccessionPrimary (citable) accession number: F6Z0J8
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)