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Protein
Submitted name:

Transmembrane p24 trafficking protein 5

Gene

TMED5

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transmembrane p24 trafficking protein 5Imported
Gene namesi
Name:TMED5Imported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
Proteomesi
  • UP000002281 Componenti: Chromosome 5

Organism-specific databases

VGNCiVGNC:24170 TMED5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei197 – 217HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500335047128 – 229Sequence analysisAdd BLAST202

Proteomic databases

PaxDbiF6XCR3

Expressioni

Gene expression databases

BgeeiENSECAG00000016426

Interactioni

Protein-protein interaction databases

STRINGi9796.ENSECAP00000014074

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 126GOLDInterPro annotationAdd BLAST82

Sequence similaritiesi

Belongs to the EMP24/GP25L family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3287 Eukaryota
ENOG410Z18S LUCA
GeneTreeiENSGT00670000097656
InParanoidiF6XCR3
KOiK14825
OMAiYDMKVQD
OrthoDBiEOG091G0RNG
TreeFamiTF313000

Family and domain databases

InterProiView protein in InterPro
IPR009038 GOLD_dom
IPR036598 GOLD_dom_sf
IPR015717 TMED5
IPR015720 TMP21-related
PANTHERiPTHR22811 PTHR22811, 1 hit
PTHR22811:SF41 PTHR22811:SF41, 1 hit
PfamiView protein in Pfam
PF01105 EMP24_GP25L, 1 hit
SMARTiView protein in SMART
SM01190 EMP24_GP25L, 1 hit
SUPFAMiSSF101576 SSF101576, 1 hit
PROSITEiView protein in PROSITE
PS50866 GOLD, 1 hit

Sequencei

Sequence statusi: Complete.

F6XCR3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDKIWLPFP VLLLAALPPV LLPGAAGFAP SLDSDFTFTL PAGQKECFYQ
60 70 80 90 100
PMPLKASLEI EYQVLDGAGL DIDFHLASPE GRTLVFEQRK SDGVHTVETE
110 120 130 140 150
VGDYMFCFDN TFSTISEKVI FFELILDNMG EQEEEQEDWK KYITGTDMLD
160 170 180 190 200
MKLEDILESI NSIKSRLSKS GHIQTLLRAF EARDRNIQES NFDRVNFWSM
210 220
VNLVVMVVVS AIQVYMLKSL FEDKRKSRT
Length:229
Mass (Da):26,080
Last modified:July 27, 2011 - v1
Checksum:i14BA7A8226979AEC
GO

Sequence databases

RefSeqiXP_001491803.1, XM_001491753.4

Genome annotation databases

EnsembliENSECAT00000017331; ENSECAP00000014074; ENSECAG00000016426
GeneIDi100051148
KEGGiecb:100051148

Similar proteinsi

Entry informationi

Entry nameiF6XCR3_HORSE
AccessioniPrimary (citable) accession number: F6XCR3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 28, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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