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Protein
Submitted name:

Uncharacterized protein

Gene

NR3C2

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi599 – 678Nuclear receptorPROSITE-ProRule annotationAdd BLAST80

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:NR3C2Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000004277.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini599 – 678Nuclear receptorInterPro annotationAdd BLAST80

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3575. Eukaryota.
ENOG410XRZC. LUCA.
GeneTreeiENSGT00760000118887.
InParanoidiF6WV84.
OMAiSKICLVC.
OrthoDBiEOG091G0166.
TreeFamiTF106510.

Family and domain databases

Gene3Di1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProiView protein in InterPro
IPR035500. NHR_like_dom_sf.
IPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
PfamiView protein in Pfam
PF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
PRINTSiPR00047. STROIDFINGER.
SMARTiView protein in SMART
SM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
SUPFAMiSSF48508. SSF48508. 1 hit.
PROSITEiView protein in PROSITE
PS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F6WV84-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METKGYHSLP EGLDMERRWG QVSQAVEHSS LGSTERTDEN NYMEIVNVSC
60 70 80 90 100
VSGAIPNNST QGSSKEKHEL LPCLQQDNNR PGVLTSDIKT ELESKELSAT
110 120 130 140 150
VAESMGLYMD SVRDADYYEQ QNQQRSMSPA KIYQNVEQLV KFYKENGHRP
160 170 180 190 200
STLSCVNRPL RSFMSDSGSS VNGGVMRAIV RSPIMCHEKS PSVCSPLNMT
210 220 230 240 250
SSVCSPAGIN SVSSTTASFG SFPVHSPITQ GTPLTCSPNV ENRGSRSHSP
260 270 280 290 300
AHASNVGSPL SSPLSSMKSS ISSPPSHCSV KSPVSSPNNV TLRSSVSSPA
310 320 330 340 350
NINNSRCSVS SPSNTNNRST LSSPAASTVG SICSPVNNAF SYTASGTSAG
360 370 380 390 400
SSTSRDVVPS PDTQEKGAQE VPFPKTEEVE SAISNGVTGQ LNIVQYIKPE
410 420 430 440 450
PDGAFSSSCL GGNSKINSDS PFSVPIKQES TKHSCSGTSF KGNPTVNPFP
460 470 480 490 500
FMDGSYFSFM DDKDYYSLSG ILGPPVPGFD GNCEGSGFPV GIKQEPDDGS
510 520 530 540 550
YYPEASIPSS AIVGVNSGGQ SFHYRIGAQG TISLSRSARD QSFQHLSSFP
560 570 580 590 600
PVNTLVESWK SHGDLSSRRS DGYPVLEYIP ENVSSSTLRS VSTGSSRPSK
610 620 630 640 650
ICLVCGDEAS GCHYGVVTCG SCKVFFKRAV EGKCSWQHNY LCAGRNDCII
660 670 680 690 700
DKIRRKNCPA CRLQKCLQAG MNLGARKSKK LGKLKGIHEE QPQQQQPPPP
710 720 730 740 750
PPPPQSPEEG TTYIAPAKEP SVNTALVPQL STISRALTPS PAMVLENIEP
760 770 780 790 800
EVVYAGYDNS KPDTAENLLS TLNRLAGKQM IQVVKWAKVL PGFKNLPLED
810 820 830 840 850
QITLIQYSWM CLSSFALSWR SYKHTNSQFL YFAPDLVFNE EKMHQSAMYE
860 870 880 890 900
LCQGMHQISL QFIRLQLTFE EYTIMKVLLL LSTVPKDGLK SQAAFEEMRT
910 920 930 940 950
NYIKELRKMV TKCPNNSGQS WQRFYQLTKL LDSMHDLVND LLEFCFYTFR
960 970 980
ESQALKVEFP AMLVEIISDQ LPKVESGNAK PLYFHRK
Length:987
Mass (Da):107,720
Last modified:July 27, 2011 - v1
Checksum:i48204072BB71E851
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACFV01002443 Genomic DNA. No translation available.
ACFV01002444 Genomic DNA. No translation available.
ACFV01002445 Genomic DNA. No translation available.
ACFV01002446 Genomic DNA. No translation available.
ACFV01002447 Genomic DNA. No translation available.
ACFV01002448 Genomic DNA. No translation available.
ACFV01002449 Genomic DNA. No translation available.
ACFV01002450 Genomic DNA. No translation available.
ACFV01002451 Genomic DNA. No translation available.
ACFV01002452 Genomic DNA. No translation available.
RefSeqiXP_008990812.1. XM_008992564.2.
XP_008990813.1. XM_008992565.2.

Genome annotation databases

EnsembliENSCJAT00000004508; ENSCJAP00000004277; ENSCJAG00000002360.
GeneIDi100405081.

Similar proteinsi

Entry informationi

Entry nameiF6WV84_CALJA
AccessioniPrimary (citable) accession number: F6WV84
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: November 22, 2017
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported