F6WTV1 (F6WTV1_HORSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSECAP00000007116

Gene names

Name:

NEIL3 Ensembl ENSECAP00000007116

Organism

Equus caballus (Horse) [Reference proteome] Ensembl ENSECAP00000007116

Taxonomic identifier

9796 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Perissodactyla › Equidae › Equus › Equus

Protein attributes

Sequence length	606 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSECAP00000007116

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: InterPro nucleotide-excision repair Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleus Inferred from electronic annotation. Source: Compara
Molecular_function	DNA N-glycosylase activity Inferred from electronic annotation. Source: Compara DNA-(apurinic or apyrimidinic site) lyase activity Inferred from electronic annotation. Source: Compara bubble DNA binding Inferred from electronic annotation. Source: Compara damaged DNA binding Inferred from electronic annotation. Source: InterPro double-stranded DNA binding Inferred from electronic annotation. Source: Compara single-stranded DNA binding Inferred from electronic annotation. Source: Compara zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6WTV1 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 2BCB620290688EA7	FASTA	606	67,379
	10 20 30 40 50 60 MVEGPGCTLN GEKIRARVRP GQAVTAVRGS ALQSLGGPAW GAAAGAVVPA QAAALKNKED 70 80 90 100 110 120 SSQNVSRLFD GYVYSGVETL GKELFMYFGP KALWIHFGMK GSIIINPPED KKKDGVSPVF 130 140 150 160 170 180 EVQLTKDLIC FFDSSVELRN STESQQRIRI MGELDICSPK FSFSRAESEV KKQKGRMLCD 190 200 210 220 230 240 VLMDQKVLPG VGNIIKNEAL FDSGLHPAVK VCQLTDEQTH HLVKMIRDCS ILFYKCRKAG 250 260 270 280 290 300 CAISRHYKVY KRPNCGQCCC KITVCRLGEN HRMTYFCPHC QKENPQHVDI CKLPTRNSTI 310 320 330 340 350 360 SWTSSRDNHL MDHVARKSEE QWTCVVCTLI NKPSSKACDA CLTSRPVDSI LKNEDSSIAY 370 380 390 400 410 420 SHLVKYPCNS FGNPNTEVKI NRKTAFGTTT LVLTDFSNKS NALERKTSQN QTLDGEFQNS 430 440 450 460 470 480 SPTNVCLRDT PHPSKERKNC VTQLSNEVSV TPAVCSPSKL FSPAYKKLKR APSSSPDLKS 490 500 510 520 530 540 HNRGFPNREL QIKMTDGPCA GNASSPRCSQ HHRLCALRVV RKDGENKGRQ FYACPLPREA 550 560 570 580 590 600 QCGFFQWADL SFPFCDHGKR SIMRTVLKIG PNNGRNFFVC PLGKEKQCSF FQWAENGPGI KILPGC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence, comparative analysis, and population genetics of the domestic horse." Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F., Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H., Distl O., Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N., Penedo M.C.T. , Raison J.M., Sharpe T., Vogel J., Andersson L., Antczak D.F., Biagi T., Binns M.M., Chowdhary B.P., Coleman S.J., Della Valle G., Fryc S., Guerin G., Hasegawa T., Hill E.W., Jurka J., Kiialainen A., Lindgren G., Liu J., Magnani E., Mickelson J.R., Murray J., Nergadze S.G., Onofrio R., Pedroni S., Piras M.F., Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A., Searle S., Skow L., Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J., Vaudin M., White J.R., Zody M.C., Lander E.S., Lindblad-Toh K. Science 326:865-867(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Thoroughbred Ensembl ENSECAP00000007116.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Thoroughbred Ensembl ENSECAP00000007116.

Cross-references

Sequence databases
RefSeq	XP_001492738.2. XM_001492688.2.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSECAT00000009361; ENSECAP00000007116; ENSECAG00000009121.
GeneID	100060702.
KEGG	ecb:100060702.
Organism-specific databases
CTD	55247.
Phylogenomic databases
GeneTree	ENSGT00510000048146.
KO	K10569.
OMA	TKDLICF.
Family and domain databases
InterPro	IPR015886. DNA_glyclase/AP_lyase_DNA-bd. IPR015887. DNA_glyclase_Znf_dom_DNA_BS. IPR012319. DNA_glycosylase/AP_lyase_cat. IPR010979. Ribosomal_S13-like_H2TH. IPR000214. Znf_DNA_glyclase/AP_lyase. IPR010666. Znf_GRF. IPR001876. Znf_RanBP2. [Graphical view]
Pfam	PF01149. Fapy_DNA_glyco. 1 hit. PF06831. H2TH. 1 hit. PF06839. zf-GRF. 2 hits. PF00641. zf-RanBP. 1 hit. [Graphical view]
SMART	SM00547. ZnF_RBZ. 1 hit. [Graphical view]
SUPFAM	SSF81624. Form_DNAglyc_cat. 1 hit. SSF46946. Ribosomal_H2TH. 1 hit.
PROSITE	PS51068. FPG_CAT. 1 hit. PS01242. ZF_FPG_1. 1 hit. PS51066. ZF_FPG_2. 1 hit. PS01358. ZF_RANBP2_1. 1 hit. PS50199. ZF_RANBP2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6WTV1_HORSE

Accession

Primary (citable) accession number: F6WTV1

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	October 3, 2012
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)