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Protein
Submitted name:

RAB GTPase activating protein 1 like

Gene

RABGAP1L

Organism
Monodelphis domestica (Gray short-tailed opossum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RAB GTPase activating protein 1 likeImported
Gene namesi
Name:RABGAP1LImported
OrganismiMonodelphis domestica (Gray short-tailed opossum)Imported
Taxonomic identifieri13616 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaMetatheriaDidelphimorphiaDidelphidaeMonodelphis
Proteomesi
  • UP000002280 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMODG00000004361.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi13616.ENSMODP00000005370.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini224 – 339PIDInterPro annotationAdd BLAST116
Domaini626 – 812Rab-GAP TBCInterPro annotationAdd BLAST187

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili895 – 1014Sequence analysisAdd BLAST120
Coiled coili1053 – 1108Sequence analysisAdd BLAST56

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1102. Eukaryota.
COG5210. LUCA.
GeneTreeiENSGT00750000117238.
InParanoidiF6WP87.
OMAiHAHPHCT.
OrthoDBiEOG091G0AIH.
TreeFamiTF317184.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiView protein in InterPro
IPR022164. Kinesin-like.
IPR011993. PH_dom-like.
IPR006020. PTB/PI_dom.
IPR000195. Rab-GTPase-TBC_dom.
PfamiView protein in Pfam
PF12473. DUF3694. 1 hit.
PF00566. RabGAP-TBC. 1 hit.
SMARTiView protein in SMART
SM00462. PTB. 1 hit.
SM00164. TBC. 1 hit.
SUPFAMiSSF47923. SSF47923. 2 hits.
SSF50729. SSF50729. 1 hit.
PROSITEiView protein in PROSITE
PS01179. PID. 1 hit.
PS50086. TBC_RABGAP. 1 hit.

Sequencei

Sequence statusi: Complete.

F6WP87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHRDSPTLSA LEAWVQWHEK SLDPETSSAA LDGRVVFCAP SRPEHSTVLC
60 70 80 90 100
CVALSAVEPS YWFLPPVRPK QSSHAGFGLV NVAREICSPE MEVRASLQKV
110 120 130 140 150
SGSSDLVTVL NNEEFVLVPQ QAGDTSSKDD EKPQLKIVSN GDEQLEKAME
160 170 180 190 200
EILRDSEKGQ NHLLDCESSS EISDHSFTDV SANQANRPSL QLVLDASNTV
210 220 230 240 250
STLRLPSPSD PPEEDSVLFN KLTYLGCMKV SSPRNEVEAV RAMATMKSSC
260 270 280 290 300
QFPFPVTLYV PNVPEGFVRI INQSSNVEIA SFPIYKILFC ARGHDGTAES
310 320 330 340 350
DCFAFTESSR GTEDFQIHIF SCEIQEAVSR ILYSFCTAFK RSSRQVSDVK
360 370 380 390 400
DSVLPTPDSD VFTFSVSLEV KEDDGKGNFS PVPKDREKFY FKLRQGIEKK
410 420 430 440 450
VVITVQQLSN KELAIERCFG MLLSPGRNVK NSDMHLLDME SMGKSCDGRA
460 470 480 490 500
YVITGMWNPN TPTFLALNEE TPKDKRVFMT VAVDMVVTEV VEPVRFLLET
510 520 530 540 550
LVRVYPANER FWYFSRKTFT ETFFMKLKQS EGRAHASAGD AIYEVVSLQR
560 570 580 590 600
ASEKEEPVTP TSAGGPMSSQ EDEPEEESDN ELSSGTGDVS KDCPEKILYS
610 620 630 640 650
WGELLGRWHN NLGVRPKGLS TLVKSGVPEA LRAEVWQLLA DCHDNQSMLD
660 670 680 690 700
KYRILITKDS AQESVITRDI HRTFPAHDHF KDTGGDGQES LYKICKAYSV
710 720 730 740 750
YDEDIGYCQG QSFLAAVLLL HMPEEQAFCV LVKIMYDYGL RDLYKNNFED
760 770 780 790 800
LHCKFYQLER LLQEQLPDLH SHFCDLNLEA HMYASQWFLT LFTAKFPLCM
810 820 830 840 850
VFHIIDLLLC EGLNIIFHVA LALLKTSKED LLQADFEGAL KFFRVQLPKR
860 870 880 890 900
YRAEENARRL MEQACNIKVP TKKLKKYEKE YQTMRESQLQ QEDPMDRYKR
910 920 930 940 950
ENRRLQEASM RLEQENDDLA HELVTSKIAL RNDLDQAEDK ADVLNKELLL
960 970 980 990 1000
TKQRLVETEE EKRKQEEETA QLKEVFRRQL EKAESEIKKT TAIIAEYKQI
1010 1020 1030 1040 1050
CSQLSTRLEK QQAANKEELE VVKGKVMACK HCSEIFNKEG ALKLSAISQE
1060 1070 1080 1090 1100
NQGIEIDDEK DSLKKQLREM ELELAQTKLQ LVEAKCKIQE LEHQRGALMN
1110 1120 1130
EIQAAKNSWF SKTLNSIKTA TGTQPPQQPQ PSQPPKEST
Length:1,139
Mass (Da):129,306
Last modified:January 9, 2013 - v2
Checksum:iE5C731DD94CB1D11
GO

Genome annotation databases

EnsembliENSMODT00000005487; ENSMODP00000005370; ENSMODG00000004361.

Similar proteinsi

Entry informationi

Entry nameiF6WP87_MONDO
AccessioniPrimary (citable) accession number: F6WP87
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: January 9, 2013
Last modified: August 30, 2017
This is version 40 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported