F6V1I7 (F6V1I7_XENTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSXETP00000017362

Gene names

Name:

psmc3 Ensembl ENSXETP00000017362

Organism

Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) [Reference proteome] Ensembl ENSXETP00000017362

Taxonomic identifier

8364 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length	443 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities	Belongs to the AAA ATPase family. RuleBase RU003651
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSXETP00000017362

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU003651 Nucleotide-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	protein catabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	Ensembl ENSXETP00000017362

Sequences

	Sequence		Length	Mass (Da)
	F6V1I7 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: FCA7C4B9B7B5AFB1	FASTA	443	49,318
	10 20 30 40 50 60 ASAAGSANSP GLSEAINMAS IWDETEADGL GEEVLKMSTE EIIQRTRLLD SEIKIMKSEV 70 80 90 100 110 120 LRVTHELQAM RDKIKENSEK IKVNKTLPYL VSNVIELLDV DPNDQEEDGA NIDLDSQRKG 130 140 150 160 170 180 KCAVIKTSTR QTYFLPVIGL VDAEKLKPGD LVGVNKDSYL ILETLPTEYD SRVKAMEVDE 190 200 210 220 230 240 RPTEQYSDIG GLDKQIQELV EAIVLPMNHK EKFENLGIQP PKGVLMYGPP GTGKTLLARA 250 260 270 280 290 300 CAAQTKATFL KLAGPQLVQM FIGDGAKLVR DAFALAKEKA PSIIFIDELD AIGTKRFDSE 310 320 330 340 350 360 KAGDREVQRT MLELLNQLDG FQPNTQVKVI AATNRVDILD PALLRSGRLD RKIEFPMPNE 370 380 390 400 410 420 EARARIMQIH SRKMNVRFYS PDVNYEELAR CTDDFNGAQC KAVCVEAGMI ALRRGATELT 430 440 HEDYMEGILE VQAKKKANLQ YYA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of the Western clawed frog Xenopus tropicalis." Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R., Gerhard D.S. , Goodstein D., Graves T., Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., Rokhsar D.S. Science 328:633-636(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMC01121759 Genomic DNA. No translation available.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSXETT00000017362; ENSXETP00000017362; ENSXETG00000007916.
Organism-specific databases
Xenbase	XB-GENE-1009848. psmc3.
Phylogenomic databases
GeneTree	ENSGT00560000077230.
OMA	GALMYGP.
Gene expression databases
Bgee	F6V1I7.
Family and domain databases
InterPro	IPR005937. 26S_Psome_P45. IPR003593. AAA+_ATPase. IPR003959. ATPase_AAA_core. IPR003960. ATPase_AAA_CS. [Graphical view]
Pfam	PF00004. AAA. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
TIGRFAMs	TIGR01242. 26Sp45. 1 hit.
PROSITE	PS00674. AAA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6V1I7_XENTR

Accession

Primary (citable) accession number: F6V1I7

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)