F6UUY1 (F6UUY1_XENTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSXETP00000040531

Gene names

Name:

gad2 Ensembl ENSXETP00000040531 Xenbase XB-GENE-976598

Organism

Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) [Reference proteome] Ensembl ENSXETP00000040531

Taxonomic identifier

8364 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length	588 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSXETP00000040531

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid biosynthetic process Inferred from electronic annotation. Source: Compara neurotransmitter biosynthetic process Inferred from electronic annotation. Source: Compara
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6UUY1 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 14B23FFA01451AAF	FASTA	588	65,720
	10 20 30 40 50 60 MASPGSGFWP FGAEEGNKEA ENPGTAKAWC QVAQKFTGGI SSKLCSLLYG EGERAPGSVG 70 80 90 100 110 120 KNEKDELGSG ERGMACNCDT KACGCRKGEA NFSLLYSTDL LPSKNGEGVT MTFLQDVIDV 130 140 150 160 170 180 LLQYVVQTFD RSTKVIDFHY PNELLQAYNW ELSEQPQSLD GILLNCKTTL KYAIKTGHPR 190 200 210 220 230 240 YFNQLSTGLD MVGLAADWLT STANTNMFTY EIAPVFVLLE YVTLKKMREM IGWPGGSGDG 250 260 270 280 290 300 IFSPGGAISN LYAMLIARFK MFPEVKEKGM AALPRLVAFT SEHSHFSVKK GAAALGIGTD 310 320 330 340 350 360 SVILIKADER GRLIPSDLER RIIEAKQNGY VPFFVSATAG TTVYGAFDPL VSIADICKKY 370 380 390 400 410 420 RIWMHVDAAW GGGLLMSRKH KWKLNGADRA NSVTWNPHKM MGVPLQCSAL LVREEGLMQN 430 440 450 460 470 480 CNQMHASYLF QQDKHYDLSY DTGDKALQCG RHVDIFKLWL MWRAKGTTGF EAHIDKCLEL 490 500 510 520 530 540 SEYLYNKIKN REGYEMVIEG KPQHTNVCFW YVPPSLRNME DNEERMNRLS KVAPIIKARM 550 560 570 580 MEYGTTMVSY QPHGDKGNFF RMVISNPAAA HQDIDFLIEE IERLGQDL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of the Western clawed frog Xenopus tropicalis." Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R., Gerhard D.S. , Goodstein D., Graves T., Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., Rokhsar D.S. Science 328:633-636(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMC01019746 Genomic DNA. No translation available. AAMC01019747 Genomic DNA. No translation available. AAMC01019748 Genomic DNA. No translation available. AAMC01019749 Genomic DNA. No translation available.
RefSeq	XP_002933179.1. XM_002933133.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSXETT00000040531; ENSXETP00000040531; ENSXETG00000026517.
GeneID	100493806.
KEGG	xtr:100493806.
Organism-specific databases
Xenbase	XB-GENE-976598. gad2.
Phylogenomic databases
GeneTree	ENSGT00550000074275.
KO	K01580.
OMA	HQDIDFL.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR021115. Pyridoxal-P_BS. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6UUY1_XENTR

Accession

Primary (citable) accession number: F6UUY1

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	March 6, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)