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Protein
Submitted name:

Spliceosome RNA helicase DDX39B

Gene

DDX39B

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Spliceosome RNA helicase DDX39BImported
Gene namesi
Name:DDX39BImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000198563.13
HGNCiHGNC:13917 DDX39B

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000198563

PTM / Processingi

Proteomic databases

MaxQBiF6UJC5

Expressioni

Gene expression databases

BgeeiENSG00000198563

Structurei

3D structure databases

SMRiF6UJC5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini55 – 171Helicase ATP-bindingInterPro annotationAdd BLAST117
Domaini183 – 245Helicase C-terminalInterPro annotationAdd BLAST63

Phylogenomic databases

GeneTreeiENSGT00830000128348

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

Sequencei

Sequence statusi: Fragment.

F6UJC5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWTMSSWTMK MMRWRQQLGE MGLRPLPRRM SRAPMSPSTA LAFVTSCSSQ
60 70 80 90 100
SCSGPLSTVA LSIRQKVAVF FGGLSIKKDE EVLKKNCPHI VVGTPGRILA
110 120 130 140 150
LARNKSLNLK HIKHFILDEC DKMLEQLDMR RDVQEIFRMT PHEKQVMMFS
160 170 180 190 200
ATLSKEIRPV CRKFMQDPME IFVDDETKLT LHGLQQYYVK LKDNEKNRKL
210 220 230 240
FDLLDVLEFN QVVIFVKSVQ RCIALAQLLV EQNFPAIAIH RGMPQ
Length:245
Mass (Da):28,300
Last modified:July 27, 2011 - v1
Checksum:i9EA8162194217844
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei245Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL662801 Genomic DNA No translation available.
AL662847 Genomic DNA No translation available.
BX001040 Genomic DNA No translation available.
BX248516 Genomic DNA No translation available.
BX927320 Genomic DNA No translation available.
CR753820 Genomic DNA No translation available.
CR753864 Genomic DNA No translation available.
CR753892 Genomic DNA No translation available.
CR942185 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000415390; ENSP00000393172; ENSG00000230624
ENST00000427425; ENSP00000412286; ENSG00000225073
ENST00000427489; ENSP00000410915; ENSG00000235439
ENST00000431908; ENSP00000408000; ENSG00000198563
ENST00000446328; ENSP00000414096; ENSG00000215425
ENST00000448000; ENSP00000411967; ENSG00000225859
ENST00000452792; ENSP00000398978; ENSG00000229496
UCSCiuc063nba.1 human

Similar proteinsi

Entry informationi

Entry nameiF6UJC5_HUMAN
AccessioniPrimary (citable) accession number: F6UJC5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 20, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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