Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Spliceosome RNA helicase DDX39B

Gene

DDX39B

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Spliceosome RNA helicase DDX39BImported
Gene namesi
Name:DDX39BImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

HGNCiHGNC:13917. DDX39B.

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000198563.

Expressioni

Gene expression databases

BgeeiENSG00000198563.
ExpressionAtlasiF6U6E2. baseline and differential.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 73Q_MOTIFInterPro annotationAdd BLAST29

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi45 – 73Q motifPROSITE-ProRule annotationAdd BLAST29

Phylogenomic databases

eggNOGiKOG0329. Eukaryota.
COG0513. LUCA.
GeneTreeiENSGT00830000128348.

Family and domain databases

InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Fragment.

F6U6E2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF
60 70 80 90 100
LLKPELLRAI VDCGFEHPSE VQHECIPQAI LGMDVLCQAK SGMGKTAVFV
110 120
LATLQQLEPV TGQVSVLVMC HTREL
Length:125
Mass (Da):13,519
Last modified:July 27, 2011 - v1
Checksum:iE4B26B169E3A1009
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei125Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL662801 Genomic DNA. No translation available.
AL662847 Genomic DNA. No translation available.
BX001040 Genomic DNA. No translation available.
BX248516 Genomic DNA. No translation available.
BX927320 Genomic DNA. No translation available.
CR753820 Genomic DNA. No translation available.
CR753864 Genomic DNA. No translation available.
CR753892 Genomic DNA. No translation available.
CR942185 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000412246; ENSP00000400556; ENSG00000225859.
ENST00000413544; ENSP00000402942; ENSG00000230624.
ENST00000414881; ENSP00000394963; ENSG00000229496.
ENST00000419913; ENSP00000405386; ENSG00000235439.
ENST00000423951; ENSP00000405374; ENSG00000215425.
ENST00000426189; ENSP00000409929; ENSG00000225073.
ENST00000456976; ENSP00000393984; ENSG00000198563.
UCSCiuc063nbi.1. human.

Similar proteinsi

Entry informationi

Entry nameiF6U6E2_HUMAN
AccessioniPrimary (citable) accession number: F6U6E2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: August 30, 2017
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported