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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

PTM / Processingi

Proteomic databases

PaxDbiF6TA52.

Expressioni

Gene expression databases

BgeeiENSXETG00000018840.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000040849.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini107 – 179HSAInterPro annotationAdd BLAST73
Domaini1806 – 1956Helicase C-terminalInterPro annotationAdd BLAST151

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili145 – 176Sequence analysisAdd BLAST32
Coiled coili2075 – 2102Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0391. Eukaryota.
ENOG410XP0A. LUCA.
GeneTreeiENSGT00530000063427.
InParanoidiF6TA52.
OMAiENDGFPA.
OrthoDBiEOG091G045T.
TreeFamiTF106424.

Family and domain databases

InterProiView protein in InterPro
IPR001650. Helicase_C.
IPR014012. HSA_dom.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
SMARTiView protein in SMART
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.

Sequencei

Sequence statusi: Fragment.

F6TA52-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
IAMQPCPARH QLQVCSASLA SDKMTGSNPV SPGSSAELSP FDLSGEMGDT
60 70 80 90 100
ACGSPTYDGM DGSQQDNSGG QKWDSQPEIA EQAKHEAEIE NRIAELRKEG
110 120 130 140 150
FWTPRRLSKV PEPTRPKVQW DYLCEEMQWL SADFAQERRW KRGVARKLVR
160 170 180 190 200
MVVRHHEELK QKEERARREE QAKLRRIATT IAKEVRQFWS NVEKVVQFKQ
210 220 230 240 250
QSRLEEKRKK ALDLQLDFIV GQTEKYSDLL SQSLNETLLP VSKSSSSCIG
260 270 280 290 300
SSQGGSLRTS PTPSVYQNYD GDFLPHDEED DEETIEIEER QDGNDAESQR
310 320 330 340 350
LEIELLKKES ELPLEELLQS LGPNFLQDVD PDQDVQVFTH NSPFSIRDIL
360 370 380 390 400
VPDLILVVKD SPQSPKVFEE EDDEFTANEE EGEDEEETIE AEEALEGQQD
410 420 430 440 450
HAEELSELAK EGKKTEVTLQ AFLFRVQLLK NKKAAYGFAS ECFVSKLEFG
460 470 480 490 500
SWCYRKFSVQ RCSVFSRTAV SQPEGHCSFI EVVSSYVWIS RHLDRESLQL
510 520 530 540 550
TPTAGVPTGV SKARSFLGRI NHPDRCLSPN TRSTEAVAGV GLTSTVSTAL
560 570 580 590 600
LIPLLYALPP LLLLPPPPAL GLPITGVRCP LFHFLHTKLP AFPTLCRSRA
610 620 630 640 650
FVRADLARGG RKCCTQRAEA IFCTRRCNNL APNQLASCSL HSTLFVLLLH
660 670 680 690 700
SAHVNAQDAA DRTKETLASG HFMSVINILM QLRKVCNHPN LFDPRPIHSP
710 720 730 740 750
FITSTICYIV PSLVLQALHR HPLQHVDMSM FDLINMEGRV CRYGSEVALP
760 770 780 790 800
QYKPPRALIQ EIADSPEPPP RLRPLRMKVN RMVQPVPKTD PRSVVIVNSS
810 820 830 840 850
RQMQKPLDLP PCTANPPLPS APHTTPAPSS SSSSTGAVEP SMPAPPAQVF
860 870 880 890 900
FPPPNLTHYP YYFSHLCTYL HHLFSTATPP LVQVPAGPVP AIAPGTIRPP
910 920 930 940 950
SVQSSPSGIG AQQRLILTPD MQARLPSGEV ISLSQLASVS SRPLQAPAVT
960 970 980 990 1000
KPVTLQLQGA KLTLSGAQVR QLGMGQPRPL QGNVLHLVSS GGQHHLLSQP
1010 1020 1030 1040 1050
AQLALIQALA QQTAAPAPSA SPQFVQGAGT AQLGVQTVSL QSLPHSLITA
1060 1070 1080 1090 1100
SGVVKIVVRQ ATRDVSATAP RLAQPGRLPQ TPSHPFLRVL PGAVPEPAGA
1110 1120 1130 1140 1150
RSRLQSPVPT PLPPIHNHSM PPNAESSVTP VAPQGFISSP VSLLALSPLT
1160 1170 1180 1190 1200
SANSSATPIL YPHPTASPAP SSFVPQVPAN PSPVSASNTL PAPSISTNTT
1210 1220 1230 1240 1250
LSLSSHTANA TAQLPMLNAS VSIPISTLSS SVPVPLSPLV ASASGNLSLI
1260 1270 1280 1290 1300
AATSVPSPLF SLSSSAPLSL PLAFANAPLP SLEASTQLPA LAAAAHSQAP
1310 1320 1330 1340 1350
LAAPAAAPTQ APLVAPVVAA QAPLAAARCQ APLAATRCQA AAPTQAPLAT
1360 1370 1380 1390 1400
LAAAPTQAPL ATLAAAPTQA PLAPLAAAPT QAPFAIPAAT PTKAPLAAAP
1410 1420 1430 1440 1450
TQAPLASLTA APTQAPLAAP AATPTQAPLA ATPTPAPLAA APTQAPLSTL
1460 1470 1480 1490 1500
ADAPTQAPFA ALPARAAAPT QAALPAPAAA PTQAALPAPA AAPTQAALPA
1510 1520 1530 1540 1550
PAAAPTQAAL PAPAAAPTQA ALPAPAAAPT QAASPAAAPT QAPLSAPAAA
1560 1570 1580 1590 1600
PTQAPLSAPA AAPTQAPLSA PAAAPTQAPL SAPAAAPTQA PLSAPAAAPT
1610 1620 1630 1640 1650
QAPLFAPAAA STQALPVGAA KALLAPPAVS QTPVPLAAPA PSQTPLAALT
1660 1670 1680 1690 1700
QASFTPAQAS TAQSPGLLAN LVPEQISLAV MSQVPVSLAA PAPAAPAKVT
1710 1720 1730 1740 1750
VASPAQVAVP LAAPAAAQVS LAAPAVLPNS VQVSVPLTSP SLPPSLLPLC
1760 1770 1780 1790 1800
PSPSYSSGQP VYLLLLHLSC HPSRHPCLVH PPLYPPRSLF LPLLHTCPLI
1810 1820 1830 1840 1850
LGKLQTLDRL LRQLKTGGHR VLLFTQMTRM LDVLEQFLNY HGHIYLRLDG
1860 1870 1880 1890 1900
STRVEQRQVL MERFNMDRRI FCFILSTRSG GVGINLTGAD TVIFYDSDWN
1910 1920 1930 1940 1950
PTMDAQAQDR CHRIGQTRDV HIYRLVSERT VEENILKKAQ QKRMLGDMAI
1960 1970 1980 1990 2000
EGGNFTTAYF KQQTIRELFD MEEATRKEAE AGSASPERTV DDGSTTQNAN
2010 2020 2030 2040 2050
ILEQALCRAE DEEDTLAASL VRAEQVADLA EFNENAPLEP EEEEQSRAEQ
2060 2070 2080 2090 2100
EINALVEQLT PIERYAMYFL EASLEDISRE ELKQAEEQVE AARKDLFLAK
2110 2120 2130 2140 2150
EDIGPCPDDS WEEEGRKMRK VRAPPSSRPP GERVGVRMSE RLRGARTADG
2160 2170 2180 2190 2200
ADITDSPALP ETSSPDQETL EDSAPIISQT ETAVPDLNDS PNKQEATTAS
2210 2220
SPSQQPCPVS PLPPTASPPP
Length:2,220
Mass (Da):235,283
Last modified:July 27, 2011 - v1
Checksum:iF4DD3D2F97365C02
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01105967 Genomic DNA. No translation available.
AAMC01105968 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXETT00000040849; ENSXETP00000040849; ENSXETG00000018840.

Entry informationi

Entry nameiF6TA52_XENTR
AccessioniPrimary (citable) accession number: F6TA52
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 7, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported