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F6T9C2

- F6T9C2_XENTR

UniProt

F6T9C2 - F6T9C2_XENTR

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Protein
Submitted name: Uncharacterized protein
Gene
gad1
Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

ReactomeiREACT_219860. GABA synthesis.
REACT_223518. GABA synthesis, release, reuptake and degradation.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:gad1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
ProteomesiUP000008143: Unplaced

Expressioni

Gene expression databases

BgeeiF6T9C2.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00730000110441.
OMAiEYLYTKI.
OrthoDBiEOG7H1JM3.
TreeFamiTF314688.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6T9C2-1 [UniParc]FASTAAdd to Basket

« Hide

MLRKENTLPM TCSHCNDVGF LQRNNSLDDK SRIVSSFKER QASKNLLVCE    50
NIEKDSQFRR AETDFSNLFA RDLLPAKNGE EFTMQFLLEV VDILLNYVRK 100
TFDRSTKVLD FHHPHQLLEG IEGFNLELSD NPESLEQILV DCRDTLKYGV 150
RTGHPRFFNQ LSTGLDIIGL AGEWLTSTAN TNMFTYEIAP VFVLMEQITL 200
RKMREIIGWT EKDGDGIFSP GGAISNMYSI MAARYKYFPE VKTKGMAAVP 250
RLVLFTSEHS HYSIKKTGAA LGFGSENVIM VKTNERGKII PADLEAKILE 300
AKQKGYVPLY VNATAGTTVY GAFDPISEIA DICEKYNLWL HVDAAWGGGL 350
LMSRRHRHKL DGIERANSVT WNPHKMMGVL LQCSAILLRE KGILQGCNQM 400
CAGYLFQQDK QYDISYDTGD KAIQCGRHVD IFKFWLMWKA KGTVGFEAQI 450
NKCLELAEYL YSKIYNREGF EMVFNGVPEH TNVCFWYIPP SLRGMPNNEE 500
KQEKLHRVAP KIKALMMESG TTMVGYQPQG DKANFFRMVI SNPAATKSDI 550
DFLVEEIERL GQEL 564
Length:564
Mass (Da):64,147
Last modified:July 27, 2011 - v1
Checksum:iA57FA26F453E2000
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAMC01035795 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXETT00000040862; ENSXETP00000040862; ENSXETG00000018848.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAMC01035795 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSXETT00000040862 ; ENSXETP00000040862 ; ENSXETG00000018848 .

Phylogenomic databases

GeneTreei ENSGT00730000110441.
OMAi EYLYTKI.
OrthoDBi EOG7H1JM3.
TreeFami TF314688.

Enzyme and pathway databases

Reactomei REACT_219860. GABA synthesis.
REACT_223518. GABA synthesis, release, reuptake and degradation.

Gene expression databases

Bgeei F6T9C2.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
PROSITEi PS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF6T9C2_XENTR
AccessioniPrimary (citable) accession number: F6T9C2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: September 3, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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