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Protein
Submitted name:

Glutamate decarboxylase 1

Gene

gad1.1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotation
LigandPyridoxal phosphateUniRule annotation

Enzyme and pathway databases

ReactomeiR-XTR-888568 GABA synthesis

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase 1Imported
Gene namesi
Name:gad1.1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-1011699 gad1.1

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei375N6-(pyridoxal phosphate)lysineUniRule annotation1

Proteomic databases

PaxDbiF6T9C2

Expressioni

Gene expression databases

BgeeiENSXETG00000018848

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000040862

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0629 Eukaryota
COG0076 LUCA
GeneTreeiENSGT00760000119205
InParanoidiF6T9C2
OMAiFHKHFFQ
OrthoDBiEOG091G07ZU
TreeFamiTF314688

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR002129 PyrdxlP-dep_de-COase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
IPR021115 Pyridoxal-P_BS
PfamiView protein in Pfam
PF00282 Pyridoxal_deC, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
PROSITEiView protein in PROSITE
PS00392 DDC_GAD_HDC_YDC, 1 hit

Sequencei

Sequence statusi: Complete.

F6T9C2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRKENTLPM TCSHCNDVGF LQRNNSLDDK SRIVSSFKER QASKNLLVCE
60 70 80 90 100
NIEKDSQFRR AETDFSNLFA RDLLPAKNGE EFTMQFLLEV VDILLNYVRK
110 120 130 140 150
TFDRSTKVLD FHHPHQLLEG IEGFNLELSD NPESLEQILV DCRDTLKYGV
160 170 180 190 200
RTGHPRFFNQ LSTGLDIIGL AGEWLTSTAN TNMFTYEIAP VFVLMEQITL
210 220 230 240 250
RKMREIIGWT EKDGDGIFSP GGAISNMYSI MAARYKYFPE VKTKGMAAVP
260 270 280 290 300
RLVLFTSEHS HYSIKKTGAA LGFGSENVIM VKTNERGKII PADLEAKILE
310 320 330 340 350
AKQKGYVPLY VNATAGTTVY GAFDPISEIA DICEKYNLWL HVDAAWGGGL
360 370 380 390 400
LMSRRHRHKL DGIERANSVT WNPHKMMGVL LQCSAILLRE KGILQGCNQM
410 420 430 440 450
CAGYLFQQDK QYDISYDTGD KAIQCGRHVD IFKFWLMWKA KGTVGFEAQI
460 470 480 490 500
NKCLELAEYL YSKIYNREGF EMVFNGVPEH TNVCFWYIPP SLRGMPNNEE
510 520 530 540 550
KQEKLHRVAP KIKALMMESG TTMVGYQPQG DKANFFRMVI SNPAATKSDI
560
DFLVEEIERL GQEL
Length:564
Mass (Da):64,147
Last modified:July 27, 2011 - v1
Checksum:iA57FA26F453E2000
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01035795 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSXETT00000040862; ENSXETP00000040862; ENSXETG00000018848

Similar proteinsi

Entry informationi

Entry nameiF6T9C2_XENTR
AccessioniPrimary (citable) accession number: F6T9C2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 25, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health