Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

F6T9C2

- F6T9C2_XENTR

UniProt

F6T9C2 - F6T9C2_XENTR

Protein
Submitted name:

Uncharacterized protein

Gene

gad1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    ReactomeiREACT_219860. GABA synthesis.
    REACT_223518. GABA synthesis, release, reuptake and degradation.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:gad1Imported
    OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
    Taxonomic identifieri8364 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
    ProteomesiUP000008143: Unplaced

    Expressioni

    Gene expression databases

    BgeeiF6T9C2.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00730000110441.
    OMAiEYLYTKI.
    OrthoDBiEOG7H1JM3.
    TreeFamiTF314688.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    IPR021115. Pyridoxal-P_BS.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6T9C2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLRKENTLPM TCSHCNDVGF LQRNNSLDDK SRIVSSFKER QASKNLLVCE    50
    NIEKDSQFRR AETDFSNLFA RDLLPAKNGE EFTMQFLLEV VDILLNYVRK 100
    TFDRSTKVLD FHHPHQLLEG IEGFNLELSD NPESLEQILV DCRDTLKYGV 150
    RTGHPRFFNQ LSTGLDIIGL AGEWLTSTAN TNMFTYEIAP VFVLMEQITL 200
    RKMREIIGWT EKDGDGIFSP GGAISNMYSI MAARYKYFPE VKTKGMAAVP 250
    RLVLFTSEHS HYSIKKTGAA LGFGSENVIM VKTNERGKII PADLEAKILE 300
    AKQKGYVPLY VNATAGTTVY GAFDPISEIA DICEKYNLWL HVDAAWGGGL 350
    LMSRRHRHKL DGIERANSVT WNPHKMMGVL LQCSAILLRE KGILQGCNQM 400
    CAGYLFQQDK QYDISYDTGD KAIQCGRHVD IFKFWLMWKA KGTVGFEAQI 450
    NKCLELAEYL YSKIYNREGF EMVFNGVPEH TNVCFWYIPP SLRGMPNNEE 500
    KQEKLHRVAP KIKALMMESG TTMVGYQPQG DKANFFRMVI SNPAATKSDI 550
    DFLVEEIERL GQEL 564
    Length:564
    Mass (Da):64,147
    Last modified:July 27, 2011 - v1
    Checksum:iA57FA26F453E2000
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAMC01035795 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSXETT00000040862; ENSXETP00000040862; ENSXETG00000018848.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAMC01035795 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSXETT00000040862 ; ENSXETP00000040862 ; ENSXETG00000018848 .

    Phylogenomic databases

    GeneTreei ENSGT00730000110441.
    OMAi EYLYTKI.
    OrthoDBi EOG7H1JM3.
    TreeFami TF314688.

    Enzyme and pathway databases

    Reactomei REACT_219860. GABA synthesis.
    REACT_223518. GABA synthesis, release, reuptake and degradation.

    Gene expression databases

    Bgeei F6T9C2.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    IPR021115. Pyridoxal-P_BS.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    PROSITEi PS00392. DDC_GAD_HDC_YDC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (JUN-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiF6T9C2_XENTR
    AccessioniPrimary (citable) accession number: F6T9C2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3