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F6T9C2

- F6T9C2_XENTR

UniProt

F6T9C2 - F6T9C2_XENTR

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Protein
Submitted name:

Uncharacterized protein

Gene

gad1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

ReactomeiREACT_219860. GABA synthesis.
REACT_223518. GABA synthesis, release, reuptake and degradation.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:gad1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
ProteomesiUP000008143: Unplaced

Expressioni

Gene expression databases

BgeeiF6T9C2.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00760000119205.
InParanoidiF6T9C2.
OMAiEYLYTKI.
OrthoDBiEOG7H1JM3.
TreeFamiTF314688.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6T9C2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLRKENTLPM TCSHCNDVGF LQRNNSLDDK SRIVSSFKER QASKNLLVCE
60 70 80 90 100
NIEKDSQFRR AETDFSNLFA RDLLPAKNGE EFTMQFLLEV VDILLNYVRK
110 120 130 140 150
TFDRSTKVLD FHHPHQLLEG IEGFNLELSD NPESLEQILV DCRDTLKYGV
160 170 180 190 200
RTGHPRFFNQ LSTGLDIIGL AGEWLTSTAN TNMFTYEIAP VFVLMEQITL
210 220 230 240 250
RKMREIIGWT EKDGDGIFSP GGAISNMYSI MAARYKYFPE VKTKGMAAVP
260 270 280 290 300
RLVLFTSEHS HYSIKKTGAA LGFGSENVIM VKTNERGKII PADLEAKILE
310 320 330 340 350
AKQKGYVPLY VNATAGTTVY GAFDPISEIA DICEKYNLWL HVDAAWGGGL
360 370 380 390 400
LMSRRHRHKL DGIERANSVT WNPHKMMGVL LQCSAILLRE KGILQGCNQM
410 420 430 440 450
CAGYLFQQDK QYDISYDTGD KAIQCGRHVD IFKFWLMWKA KGTVGFEAQI
460 470 480 490 500
NKCLELAEYL YSKIYNREGF EMVFNGVPEH TNVCFWYIPP SLRGMPNNEE
510 520 530 540 550
KQEKLHRVAP KIKALMMESG TTMVGYQPQG DKANFFRMVI SNPAATKSDI
560
DFLVEEIERL GQEL
Length:564
Mass (Da):64,147
Last modified:July 27, 2011 - v1
Checksum:iA57FA26F453E2000
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAMC01035795 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXETT00000040862; ENSXETP00000040862; ENSXETG00000018848.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAMC01035795 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSXETT00000040862 ; ENSXETP00000040862 ; ENSXETG00000018848 .

Phylogenomic databases

GeneTreei ENSGT00760000119205.
InParanoidi F6T9C2.
OMAi EYLYTKI.
OrthoDBi EOG7H1JM3.
TreeFami TF314688.

Enzyme and pathway databases

Reactomei REACT_219860. GABA synthesis.
REACT_223518. GABA synthesis, release, reuptake and degradation.

Gene expression databases

Bgeei F6T9C2.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
PROSITEi PS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF6T9C2_XENTR
AccessioniPrimary (citable) accession number: F6T9C2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 29, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3