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F6T3Q0 (F6T3Q0_MACMU) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length602 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMMUP00000009704

Sequences

Sequence LengthMass (Da)Tools
F6T3Q0 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 545724F5B50CB56D

FASTA60267,271
        10         20         30         40         50         60 
MVEGPGCTLN GEKIRARVLP GQAVTGVRGS ALRSLQGRAL PLAASTAVVS PQASALNNND 

        70         80         90        100        110        120 
ASSLFNGYVY SGVETLGKEL FMYFGPKAFR IHFGMKGSIM INPLECKYKN GASPVLEVQL 

       130        140        150        160        170        180 
TKDLICFFDS SVELRNSMES QRRVGMMKEL DVCSPEFSFL RAENEVKKQK GRMLGDVLMD 

       190        200        210        220        230        240 
QNVLPGVGNI IKNEALFDSG LHPAVKVCQL TDEQTHHLVK MIRDFSILFY RCRKAGLAVS 

       250        260        270        280        290        300 
KHYKVYKRPN CGQCHCRITV CRFGDNNRMT YFCPRCQKEN PQHVDICRLP TRNTIISWTS 

       310        320        330        340        350        360 
SRVDHVMDSV ARKSEEQWTC VVCTLINKPS SKACDACLTS RPIDSMLKNE ENSTVFSHLM 

       370        380        390        400        410        420 
KYPCNTFGKP HTEVKINRKT AFGTTTLVLT DFSNKSSTLE IKKKQNQTLD KEFQNSPPTN 

       430        440        450        460        470        480 
VCLKDTQHPS KKRTNNITQL SSKVNIAPTI SSESKLFSPA HKKLKTAHCS SPDLKSCNPG 

       490        500        510        520        530        540 
YSSSELQINV TDGPRTLNPD GPRCSKHSRL CVLRVVRKDG ENKGRQFYAC PLPREAQCGF 

       550        560        570        580        590        600 
FEWADLSFPF CNHGKRSIMK TVLKIGPNNG KNFFVCPLGK EKQCNFFQWA ENGPGMKIIP 


GC 

« Hide

References

« Hide 'large scale' references
[1]"Evolutionary and biomedical insights from the rhesus macaque genome."
Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M., Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C., Wilson R.K., Batzer M.A., Bustamante C.D., Eichler E.E., Hahn M.W., Hardison R.C., Makova K.D., Miller W., Milosavljevic A. expand/collapse author list , Palermo R.E., Siepel A., Sikela J.M., Attaway T., Bell S., Bernard K.E., Buhay C.J., Chandrabose M.N., Dao M., Davis C., Delehaunty K.D., Ding Y., Dinh H.H., Dugan-Rocha S., Fulton L.A., Gabisi R.A., Garner T.T., Godfrey J., Hawes A.C., Hernandez J., Hines S., Holder M., Hume J., Jhangiani S.N., Joshi V., Khan Z.M., Kirkness E.F., Cree A., Fowler R.G., Lee S., Lewis L.R., Li Z., Liu Y.-S., Moore S.M., Muzny D., Nazareth L.V., Ngo D.N., Okwuonu G.O., Pai G., Parker D., Paul H.A., Pfannkoch C., Pohl C.S., Rogers Y.-H.C., Ruiz S.J., Sabo A., Santibanez J., Schneider B.W., Smith S.M., Sodergren E., Svatek A.F., Utterback T.R., Vattathil S., Warren W., White C.S., Chinwalla A.T., Feng Y., Halpern A.L., Hillier L.W., Huang X., Minx P., Nelson J.O., Pepin K.H., Qin X., Sutton G.G., Venter E., Walenz B.P., Wallis J.W., Worley K.C., Yang S.-P., Jones S.M., Marra M.A., Rocchi M., Schein J.E., Baertsch R., Clarke L., Csuros M., Glasscock J., Harris R.A., Havlak P., Jackson A.R., Jiang H., Liu Y., Messina D.N., Shen Y., Song H.X.-Z., Wylie T., Zhang L., Birney E., Han K., Konkel M.K., Lee J., Smit A.F.A., Ullmer B., Wang H., Xing J., Burhans R., Cheng Z., Karro J.E., Ma J., Raney B., She X., Cox M.J., Demuth J.P., Dumas L.J., Han S.-G., Hopkins J., Karimpour-Fard A., Kim Y.H., Pollack J.R., Vinar T., Addo-Quaye C., Degenhardt J., Denby A., Hubisz M.J., Indap A., Kosiol C., Lahn B.T., Lawson H.A., Marklein A., Nielsen R., Vallender E.J., Clark A.G., Ferguson B., Hernandez R.D., Hirani K., Kehrer-Sawatzki H., Kolb J., Patil S., Pu L.-L., Ren Y., Smith D.G., Wheeler D.A., Schenck I., Ball E.V., Chen R., Cooper D.N., Giardine B., Hsu F., Kent W.J., Lesk A., Nelson D.L., O'brien W.E., Pruefer K., Stenson P.D., Wallace J.C., Ke H., Liu X.-M., Wang P., Xiang A.P., Yang F., Barber G.P., Haussler D., Karolchik D., Kern A.D., Kuhn R.M., Smith K.E., Zwieg A.S.
Science 316:222-234(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 17573 Ensembl ENSMMUP00000009704.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: 17573 Ensembl ENSMMUP00000009704.

Cross-references

Sequence databases

RefSeqXP_001090459.1. XM_001090459.2.
UniGeneMmu.28308.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMMUT00000010342; ENSMMUP00000009704; ENSMMUG00000007394.
GeneID699618.
KEGGmcc:699618.

Organism-specific databases

CTD55247.

Phylogenomic databases

GeneTreeENSGT00730000110955.
KOK10569.
OMAICFFDSS.
OrthoDBEOG7W153D.
TreeFamTF331502.

Family and domain databases

InterProIPR015886. DNA_glyclase/AP_lyase_DNA-bd.
IPR015887. DNA_glyclase_Znf_dom_DNA_BS.
IPR012319. DNA_glycosylase/AP_lyase_cat.
IPR010979. Ribosomal_S13-like_H2TH.
IPR000214. Znf_DNA_glyclase/AP_lyase.
IPR010666. Znf_GRF.
IPR001876. Znf_RanBP2.
[Graphical view]
PfamPF06831. H2TH. 1 hit.
PF06839. zf-GRF. 2 hits.
PF00641. zf-RanBP. 1 hit.
[Graphical view]
SMARTSM00547. ZnF_RBZ. 1 hit.
[Graphical view]
SUPFAMSSF46946. SSF46946. 1 hit.
SSF81624. SSF81624. 1 hit.
PROSITEPS51068. FPG_CAT. 1 hit.
PS01242. ZF_FPG_1. 1 hit.
PS51066. ZF_FPG_2. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio19960255.

Entry information

Entry nameF6T3Q0_MACMU
AccessionPrimary (citable) accession number: F6T3Q0
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: February 19, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)