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Protein
Submitted name:

Uncharacterized protein

Gene

CYSLTR2

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:CYSLTR2Imported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus
ProteomesiUP000002281 Componenti: Chromosome 17

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei44 – 6522HelicalSequence analysisAdd
BLAST
Transmembranei77 – 9418HelicalSequence analysisAdd
BLAST
Transmembranei114 – 13623HelicalSequence analysisAdd
BLAST
Transmembranei156 – 17520HelicalSequence analysisAdd
BLAST
Transmembranei201 – 22525HelicalSequence analysisAdd
BLAST
Transmembranei246 – 26722HelicalSequence analysisAdd
BLAST
Transmembranei287 – 30923HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF6RWL0.

Interactioni

Protein-protein interaction databases

STRINGi9796.ENSECAP00000003194.

Structurei

3D structure databases

ProteinModelPortaliF6RWL0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini56 – 306251G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IGJM. Eukaryota.
ENOG410YDV0. LUCA.
GeneTreeiENSGT00760000118784.
InParanoidiF6RWL0.
OMAiTMNYIAL.
OrthoDBiEOG74FF1B.
TreeFamiTF350009.

Family and domain databases

InterProiIPR013311. CLT2_recept.
IPR004071. Cyst_leuk_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR01903. CYSLT2RECPTR.
PR01533. CYSLTRECPTR.
PR00237. GPCRRHODOPSN.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6RWL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERKLMSSVP SVSSSETEPN GTFSSNDSHR NCTIENFKRE FYPIIYLIIF
60 70 80 90 100
VWGALGNGFS IYVFLQPYKK CTSVNVFMLN LAISDLLFTS TLPFRADYYL
110 120 130 140 150
RGSNWIFGDL ACRIMSYSLY VNMYSSIYFL TVLSVVRFLA TVHPFRLLHV
160 170 180 190 200
TSIRSAWILC GIIWIFIMAS SAVLLKNGSE QDGNVTLCLE LNLNKVIKLQ
210 220 230 240 250
ALNYLALVVG FLLPFCTLSI CYLLIIRALL MVKVSETGLR VSHRKALTTI
260 270 280 290 300
IISLVIFLLC FLPYHVLRTL HLVMWEVGTC IDWLHKAVVI TLALAATNSC
310 320 330 340
FNPLLYYFAG ENFKDRLRSA VRKCHLQKIK CSFPVCVWLK KETRV
Length:345
Mass (Da):39,405
Last modified:July 27, 2011 - v1
Checksum:i4492E71B8943A39A
GO

Genome annotation databases

EnsembliENSECAT00000004606; ENSECAP00000003194; ENSECAG00000004678.

Cross-referencesi

3D structure databases

ProteinModelPortaliF6RWL0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9796.ENSECAP00000003194.

Proteomic databases

PaxDbiF6RWL0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSECAT00000004606; ENSECAP00000003194; ENSECAG00000004678.

Phylogenomic databases

eggNOGiENOG410IGJM. Eukaryota.
ENOG410YDV0. LUCA.
GeneTreeiENSGT00760000118784.
InParanoidiF6RWL0.
OMAiTMNYIAL.
OrthoDBiEOG74FF1B.
TreeFamiTF350009.

Family and domain databases

InterProiIPR013311. CLT2_recept.
IPR004071. Cyst_leuk_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR01903. CYSLT2RECPTR.
PR01533. CYSLTRECPTR.
PR00237. GPCRRHODOPSN.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence, comparative analysis, and population genetics of the domestic horse."
    Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team
    Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F., Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H., Distl O., Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N., Penedo M.C.T.
    , Raison J.M., Sharpe T., Vogel J., Andersson L., Antczak D.F., Biagi T., Binns M.M., Chowdhary B.P., Coleman S.J., Della Valle G., Fryc S., Guerin G., Hasegawa T., Hill E.W., Jurka J., Kiialainen A., Lindgren G., Liu J., Magnani E., Mickelson J.R., Murray J., Nergadze S.G., Onofrio R., Pedroni S., Piras M.F., Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A., Searle S., Skow L., Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J., Vaudin M., White J.R., Zody M.C., Lander E.S., Lindblad-Toh K.
    Science 326:865-867(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ThoroughbredImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: ThoroughbredImported.

Entry informationi

Entry nameiF6RWL0_HORSE
AccessioniPrimary (citable) accession number: F6RWL0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: December 9, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.