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Protein

Fibroblast growth factor

Gene

fgf4/5/6

Organism
Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionGrowth factorSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Fibroblast growth factorUniRule annotation
Short name:
FGFUniRule annotation
Gene namesi
Name:fgf4/5/6Imported
OrganismiCiona intestinalis (Transparent sea squirt) (Ascidia intestinalis)Imported
Taxonomic identifieri7719 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataTunicataAscidiaceaEnterogonaPhlebobranchiaCionidaeCiona
Proteomesi
  • UP000008144 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 23HelicalSequence analysisAdd BLAST18

Keywords - Cellular componenti

Membrane

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi7719.ENSCINP00000001146.

Family & Domainsi

Sequence similaritiesi

Belongs to the heparin-binding growth factors family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3885. Eukaryota.
ENOG4111IPH. LUCA.
GeneTreeiENSGT00760000118859.
InParanoidiF6RRN2.
OrthoDBiEOG091G0NAY.
TreeFamiTF317805.

Family and domain databases

CDDicd00058. FGF. 1 hit.
InterProiView protein in InterPro
IPR002209. Fibroblast_GF_fam.
IPR008996. IL1/FGF.
PANTHERiPTHR11486. PTHR11486. 1 hit.
PfamiView protein in Pfam
PF00167. FGF. 1 hit.
PRINTSiPR00263. HBGFFGF.
SMARTiView protein in SMART
SM00442. FGF. 1 hit.
SUPFAMiSSF50353. SSF50353. 1 hit.

Sequencei

Sequence statusi: Complete.

F6RRN2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLRSVLIKV VIIAIVICVL IHCSDARRRR QRRTGSHRGF ESRRRSDRSR
60 70 80 90 100
SVKVHEDPHK ETIRAIQVTG SIFSRLLHPH NNHQPNIKLV RRERLYCRVG
110 120 130 140 150
IGYQLEVRKD GKVTARHQST KNGIFEVFSM KHGVVGIRSE RHRRYVCMNK
160 170 180 190 200
RGRVFTRRSF RHDCEFREEL EANGYVTFAS QLYSDHQRRL GYFLAVSKRG
210 220
KPRRGKRVTW KMQSAHWLAR TVTDKKSNT
Length:229
Mass (Da):27,052
Last modified:July 27, 2011 - v1
Checksum:i4F87D10F27506C21
GO

Genome annotation databases

EnsembliENSCINT00000001146; ENSCINP00000001146; ENSCING00000000625.

Similar proteinsi

Entry informationi

Entry nameiF6RRN2_CIOIN
AccessioniPrimary (citable) accession number: F6RRN2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 25, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported