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Protein
Submitted name:

Uncharacterized protein

Gene

brachyury

Organism
Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:brachyuryImported
OrganismiCiona intestinalis (Transparent sea squirt) (Ascidia intestinalis)Imported
Taxonomic identifieri7719 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataTunicataAscidiaceaEnterogonaPhlebobranchiaCionidaeCiona
Proteomesi
  • UP000008144 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi7719.ENSCINP00000001477.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585. Eukaryota.
ENOG410XSTS. LUCA.
GeneTreeiENSGT00900000140847.
HOVERGENiHBG004599.
InParanoidiF6RP59.
OMAiFHAFVNE.
OrthoDBiEOG091G05OC.
TreeFamiTF106341.

Family and domain databases

CDDicd00182. TBOX. 1 hit.
Gene3Di2.60.40.820. 1 hit.
InterProiView protein in InterPro
IPR008967. p53-like_TF_DNA-bd.
IPR036960. T-box_sf.
IPR002070. TF_Brachyury.
IPR001699. TF_T-box.
IPR018186. TF_T-box_CS.
PANTHERiPTHR11267. PTHR11267. 1 hit.
PfamiView protein in Pfam
PF00907. T-box. 1 hit.
PRINTSiPR00938. BRACHYURY.
PR00937. TBOX.
SMARTiView protein in SMART
SM00425. TBOX. 1 hit.
SUPFAMiSSF49417. SSF49417. 1 hit.
PROSITEiView protein in PROSITE
PS01283. TBOX_1. 1 hit.
PS01264. TBOX_2. 1 hit.
PS50252. TBOX_3. 1 hit.

Sequencei

Sequence statusi: Complete.

F6RP59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSSDSKLAG MTSSESIETC AVKMALIEHG LWSRFHAFVN EMIVTKNGRR
60 70 80 90 100
MFPVLKTSIT GLDPTAMYSV MLDFVPVDNN RWKYVNGEWI PGGKPEPHVS
110 120 130 140 150
SCAYIHPDSP NFGSHWMKQP VGFSRVKLTN KATGNPQQIM LNSLHKYEPR
160 170 180 190 200
IHIMRVGGAE SQQVVASHSF QETRFIAVTA YQNEDVTSLK IKYNPFAKAF
210 220 230 240 250
LDAKERSGSE NYFKDSTKAG SSQNYSRANT WTANQSNPTF NQCQYESGIP
260 270 280 290 300
PFHYPIPNQP KTTRERRMSR TQRSHPYKPS TTQIYQDFQP TNYPALPNDQ
310 320 330 340 350
WQSSIEGHEL DEGHFSLEPV SVDDVTALGF DTPHQGFATN DLLSIEPSYS
360 370 380 390 400
LDYPQFTTTW SYPTNHMPGY VSNSPIRSLE QPEYFYRGYD VSQQNYVTMT
410 420 430
SADVSNVTSS LYETPSPGVM QRPQEDFSIA YTPLTPPSL
Length:439
Mass (Da):49,637
Last modified:April 18, 2012 - v1
Checksum:i9A13C30FB65E1094
GO

Genome annotation databases

EnsembliENSCINT00000001477; ENSCINP00000001477; ENSCING00000000810.

Similar proteinsi

Entry informationi

Entry nameiF6RP59_CIOIN
AccessioniPrimary (citable) accession number: F6RP59
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: October 25, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported