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F6RP29 (F6RP29_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length284 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Endonuclease that specifically degrades the RNA of RNA-DNA hybrids By similarity. RuleBase RU003515

Catalytic activity

Endonucleolytic cleavage to 5'-phosphomonoester. RuleBase RU003515

Sequence similarities

Belongs to the RNase HII family. RuleBase RU003515

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000121864

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 Ensembl ENSMUSP00000121864

Sequences

Sequence LengthMass (Da)Tools
F6RP29 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 55A8AD85FC4A3AAF

FASTA28431,370
        10         20         30         40         50         60 
SFRGKRALGP ALAVLFSTIV GCRRGSMDLS ELERDNTGRC RLSSPVPAVC LKEPCVLGVD 

        70         80         90        100        110        120 
EAGRGPVLGP MVYAICYCPL SRLADLEALK VADSKTLTEN ERERLFAKME EDGDFVGWAL 

       130        140        150        160        170        180 
DVLSPNLIST SMLGRVKYNL NSLSHDTAAG LIQYALDQNV NVTQVFVDTV GMPETYQARL 

       190        200        210        220        230        240 
QQHFPGIEVT VKAKADSLFP VVSAASIFAK VARDKAVKNW QFVENLQDLD SDYGSGYPND 

       250        260        270        280 
PKTKAWLRKH VDPVFGFPQF VRFSWSTAQA ILEKEAEDVI WFVS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC163703 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalF6RP29.
SMRF6RP29. Positions 27-281.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000128972; ENSMUSP00000121864; ENSMUSG00000052926.

Organism-specific databases

MGIMGI:1916974. Rnaseh2a.

Phylogenomic databases

GeneTreeENSGT00390000010768.

Gene expression databases

ArrayExpressF6RP29.
BgeeF6RP29.

Family and domain databases

Gene3D1.10.10.460. 1 hit.
3.30.420.10. 1 hit.
InterProIPR004649. RNase_H2_suA.
IPR001352. RNase_HII/HIII.
IPR024567. RNase_HII/HIII_dom.
IPR023160. RNase_HII_hlx-loop-hlx_cap_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PANTHERPTHR10954. PTHR10954. 1 hit.
PfamPF01351. RNase_HII. 1 hit.
[Graphical view]
SUPFAMSSF53098. SSF53098. 1 hit.
TIGRFAMsTIGR00729. TIGR00729. 1 hit.
ProtoNetSearch...

Other

ChiTaRSRNASEH2A. mouse.
NextBio35556789.
SOURCESearch...

Entry information

Entry nameF6RP29_MOUSE
AccessionPrimary (citable) accession number: F6RP29
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)