SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F6RIS8

- F6RIS8_MOUSE

UniProt

F6RIS8 - F6RIS8_MOUSE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Collagen alpha-3(IV) chain
Gene
Col4a3
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. extracellular matrix structural constituent Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Collagen alpha-3(IV) chainImported
Gene namesi
Name:Col4a3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 1

Organism-specific databases

MGIiMGI:104688. Col4a3.

Subcellular locationi

GO - Cellular componenti

  1. basement membrane Source: MGI
  2. collagen type IV trimer Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

ArrayExpressiF6RIS8.
BgeeiF6RIS8.

Structurei

3D structure databases

ProteinModelPortaliF6RIS8.
SMRiF6RIS8. Positions 8-150.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00720000108691.

Family and domain databases

Gene3Di2.170.240.10. 1 hit.
InterProiIPR016187. C-type_lectin_fold.
IPR001442. Collagen_VI_NC.
[Graphical view]
PfamiPF01413. C4. 2 hits.
[Graphical view]
SMARTiSM00111. C4. 1 hit.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 2 hits.
PROSITEiPS51403. NC1_IV. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

F6RIS8-1 [UniParc]FASTAAdd to Basket

« Hide

ATGTRMRGFI FTRHSQTTAI PSCPEGTQPL YSGFSLLFVQ GNKRAHGQDL    50
GTLGSCLQRF TTMPFLFCNI NNVCNFASRN DYSYWLSTPA LMPMDMAPIS 100
GRALEPYISR CTVCEGPAMA IAVHSQTTAI PPCPQDWVSL WKGFSFIMKT 150
YSINCESWRL RENHKPLSGV HEEKTLTKSK KPEPFFFFFF FFLFLLK 197
Length:197
Mass (Da):22,381
Last modified:July 27, 2011 - v1
Checksum:i0EEA01E6BA6E5AAC
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC123746 Genomic DNA. No translation available.
AC138214 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000152664; ENSMUSP00000119094; ENSMUSG00000079465.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC123746 Genomic DNA. No translation available.
AC138214 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali F6RIS8.
SMRi F6RIS8. Positions 8-150.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000152664 ; ENSMUSP00000119094 ; ENSMUSG00000079465 .

Organism-specific databases

MGIi MGI:104688. Col4a3.

Phylogenomic databases

GeneTreei ENSGT00720000108691.

Miscellaneous databases

ChiTaRSi COL4A3. mouse.
NextBioi 35556745.
SOURCEi Search...

Gene expression databases

ArrayExpressi F6RIS8.
Bgeei F6RIS8.

Family and domain databases

Gene3Di 2.170.240.10. 1 hit.
InterProi IPR016187. C-type_lectin_fold.
IPR001442. Collagen_VI_NC.
[Graphical view ]
Pfami PF01413. C4. 2 hits.
[Graphical view ]
SMARTi SM00111. C4. 1 hit.
[Graphical view ]
SUPFAMi SSF56436. SSF56436. 2 hits.
PROSITEi PS51403. NC1_IV. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (JUN-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiF6RIS8_MOUSE
AccessioniPrimary (citable) accession number: F6RIS8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 9, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3