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Protein
Submitted name:

Uncharacterized protein

Gene

casp3

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase, Protease, Thiol proteaseSAAS annotation

Enzyme and pathway databases

ReactomeiR-XTR-111465. Apoptotic cleavage of cellular proteins.
R-XTR-2028269. Signaling by Hippo.
R-XTR-211227. Activation of DNA fragmentation factor.
R-XTR-264870. Caspase-mediated cleavage of cytoskeletal proteins.
R-XTR-351906. Apoptotic cleavage of cell adhesion proteins.
R-XTR-418889. Ligand-independent caspase activation via DCC.
R-XTR-449836. Other interleukin signaling.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:casp3Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-479960. casp3.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

PaxDbiF6RF24.

Expressioni

Gene expression databases

BgeeiENSXETG00000001537.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000003217.

Structurei

3D structure databases

ProteinModelPortaliF6RF24.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 178CASPASE_P20InterPro annotationAdd BLAST125
Domaini194 – 288CASPASE_P10InterPro annotationAdd BLAST95

Sequence similaritiesi

Belongs to the peptidase C14A family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3573. Eukaryota.
ENOG410ZQIE. LUCA.
GeneTreeiENSGT00760000118912.
InParanoidiF6RF24.
OMAiDGFYSWR.
OrthoDBiEOG091G05YD.
TreeFamiTF102023.

Family and domain databases

CDDicd00032. CASc. 1 hit.
InterProiView protein in InterPro
IPR029030. Caspase-like_dom.
IPR015470. Caspase_3.
IPR033139. Caspase_cys_AS.
IPR016129. Caspase_his_AS.
IPR002138. Pept_C14_p10.
IPR001309. Pept_C14_p20.
IPR015917. Pept_C14A.
PANTHERiPTHR10454:SF178. PTHR10454:SF178. 1 hit.
PRINTSiPR00376. IL1BCENZYME.
SMARTiView protein in SMART
SM00115. CASc. 1 hit.
SUPFAMiSSF52129. SSF52129. 1 hit.
PROSITEiView protein in PROSITE
PS01122. CASPASE_CYS. 1 hit.
PS01121. CASPASE_HIS. 1 hit.
PS50207. CASPASE_P10. 1 hit.
PS50208. CASPASE_P20. 1 hit.

Sequencei

Sequence statusi: Complete.

F6RF24-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEESHNGVQY GEDTADAKTY FTNQQISLQN CDIKDMEKKT KFAHLHKYRT
60 70 80 90 100
DYPEMGICLI INNKNFQSST NMGVRNGTDV DARKLHETFT GLGYKVKVCN
110 120 130 140 150
DQKSNDIFTL LKKMSEEDHS KRSSFVCAIL SHGEDGLVYG VDGPIQIKNL
160 170 180 190 200
TDLFRGDRCK TLVGKPKLFF IQACRGTDLD SGIETDSGSE PGEEIQRIPV
210 220 230 240 250
EADFLYAYST VPGYYSWRNT MNGSWFIQSL CEMIKLYGPH LELIQILTCV
260 270 280
NHMVALEFES CSTQQAFHAK KQIPCVVSML TKAFYFLK
Length:288
Mass (Da):32,703
Last modified:July 27, 2011 - v1
Checksum:i14BC7057AB49583D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01031932 Genomic DNA. No translation available.
AAMC01031933 Genomic DNA. No translation available.
RefSeqiXP_017946639.1. XM_018091150.1.
UniGeneiStr.11713.

Genome annotation databases

EnsembliENSXETT00000003217; ENSXETP00000003217; ENSXETG00000001537.
GeneIDi100151728.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiF6RF24_XENTR
AccessioniPrimary (citable) accession number: F6RF24
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 5, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported