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Protein

C-C motif chemokine

Gene

Ccl17

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • CCR chemokine receptor binding Source: GO_Central
  • chemokine activity Source: MGI
  • cytokine activity Source: MGI

GO - Biological processi

Keywordsi

Molecular functionCytokineUniRule annotationSAAS annotation
Biological processChemotaxisUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
C-C motif chemokineUniRule annotation
Gene namesi
Name:Ccl17Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 8

Organism-specific databases

MGIiMGI:1329039 Ccl17

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

SecretedUniRule annotation

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 33UniRule annotationAdd BLAST33
ChainiPRO_500512986634 – 103C-C motif chemokineUniRule annotationAdd BLAST70

Proteomic databases

PaxDbiF6R5P4
PRIDEiF6R5P4

Expressioni

Gene expression databases

BgeeiENSMUSG00000031780

Interactioni

GO - Molecular functioni

  • CCR chemokine receptor binding Source: GO_Central
  • chemokine activity Source: MGI
  • cytokine activity Source: MGI

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000034232

Structurei

3D structure databases

ProteinModelPortaliF6R5P4
SMRiF6R5P4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini40 – 98SCYInterPro annotationAdd BLAST59

Sequence similaritiesi

Belongs to the intercrine beta (chemokine CC) family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiENOG410J0QF Eukaryota
ENOG41113EM LUCA
GeneTreeiENSGT00530000064258
InParanoidiF6R5P4
KOiK21083
OMAiCSDPKDT
OrthoDBiEOG091G11AP
TreeFamiTF334888

Family and domain databases

InterProiView protein in InterPro
IPR000827 Chemokine_CC_CS
IPR001811 Chemokine_IL8-like_dom
IPR036048 Interleukin_8-like_sf
PfamiView protein in Pfam
PF00048 IL8, 1 hit
SMARTiView protein in SMART
SM00199 SCY, 1 hit
SUPFAMiSSF54117 SSF54117, 1 hit
PROSITEiView protein in PROSITE
PS00472 SMALL_CYTOKINES_CC, 1 hit

Sequencei

Sequence statusi: Complete.

F6R5P4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFTSAFGT MRSLQMLLLA ALLLGTFLQH ARAARATNVG RECCLDYFKG
60 70 80 90 100
AIPIRKLVSW YKTSVECSRD AIVFLTVQGK LICADPKDKH VKKAIRLVKN

PRP
Length:103
Mass (Da):11,539
Last modified:October 3, 2012 - v2
Checksum:i0E712E12F07A1EF0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC129606 Genomic DNA No translation available.
RefSeqiNP_035462.2, NM_011332.3
XP_006530845.1, XM_006530782.3
XP_006530846.1, XM_006530783.2
XP_017168112.1, XM_017312623.1
UniGeneiMm.41988

Genome annotation databases

EnsembliENSMUST00000034232; ENSMUSP00000034232; ENSMUSG00000031780
GeneIDi20295
KEGGimmu:20295
UCSCiuc009mwz.2 mouse

Similar proteinsi

Entry informationi

Entry nameiF6R5P4_MOUSE
AccessioniPrimary (citable) accession number: F6R5P4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: October 3, 2012
Last modified: May 23, 2018
This is version 52 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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