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Protein
Submitted name:

Nescient helix-loop-helix 1

Gene

nhlh1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Nescient helix-loop-helix 1Imported
Gene namesi
Name:nhlh1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-989790. nhlh1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF6R139.

Expressioni

Gene expression databases

BgeeiENSXETG00000005841.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000012850.

Structurei

3D structure databases

ProteinModelPortaliF6R139.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini71 – 123BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiKOG4029. Eukaryota.
ENOG411227D. LUCA.
GeneTreeiENSGT00760000119097.
InParanoidiF6R139.
OMAiMMLNSDA.
OrthoDBiEOG091G0RR2.

Family and domain databases

CDDicd00083. HLH. 1 hit.
Gene3Di4.10.280.10. 1 hit.
InterProiView protein in InterPro
IPR011598. bHLH_dom.
IPR036638. HLH_DNA-bd_sf.
PfamiView protein in Pfam
PF00010. HLH. 1 hit.
SMARTiView protein in SMART
SM00353. HLH. 1 hit.
SUPFAMiSSF47459. SSF47459. 1 hit.
PROSITEiView protein in PROSITE
PS50888. BHLH. 1 hit.

Sequencei

Sequence statusi: Complete.

F6R139-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TMLNSEQTEI PAHSETESVF SDCGGGGGLT DASGISFCGE TRICEASDTV
60 70 80 90 100
KRELQHLSRE ERRRRRRATA KYRTAHATRE RIRVEAFNLA FAELRKLLPT
110 120
LPPDKKLSKI EILRLAICYI SYLNHVLDV
Length:129
Mass (Da):14,590
Last modified:July 27, 2011 - v1
Checksum:i0CC57E7B9A1C8D63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01068370 Genomic DNA. No translation available.
AAMC01068371 Genomic DNA. No translation available.
AAMC01068372 Genomic DNA. No translation available.
AAMC01068373 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSXETT00000012850; ENSXETP00000012850; ENSXETG00000005841.

Similar proteinsi

Entry informationi

Entry nameiF6R139_XENTR
AccessioniPrimary (citable) accession number: F6R139
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 28, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported