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Protein
Submitted name:

Main chromosome, complete replicon

Gene

PP1Y_AT14221

Organism
Novosphingobium sp. PP1Y
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciNSP702113:GJD2-1365-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Main chromosome, complete repliconImported (EC:1.15.1.1Imported)
Gene namesi
ORF Names:PP1Y_AT14221Imported
OrganismiNovosphingobium sp. PP1YImported
Taxonomic identifieri702113 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
ProteomesiUP000009242 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6ILM0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

F6ILM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRTVRTLAV CAAALSAHAA LADNHGEAAA PPVHATVIGL DGQALGMVTL
60 70 80 90 100
QDTPTGVLVS TDIKGLPEGE HGFHFHEKGV CQPAEKFATA GGHFAAGGAM
110 120 130 140 150
HGLMVEGGPH GGDMPNQHVG ADGVLETQIL NTGVTLAPGP KSLEDADGSA
160 170 180
LVIHAGADDY KSQPSGAAGG RIACAVISAP K
Length:181
Mass (Da):18,003
Last modified:July 27, 2011 - v1
Checksum:i93872BB00D77D657
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR856862 Genomic DNA. Translation: CCA92322.1.
RefSeqiWP_013832695.1. NC_015580.1.
YP_004534140.1. NC_015580.1.

Genome annotation databases

EnsemblBacteriaiCCA92322; CCA92322; PP1Y_AT14221.
KEGGinpp:PP1Y_AT14221.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR856862 Genomic DNA. Translation: CCA92322.1.
RefSeqiWP_013832695.1. NC_015580.1.
YP_004534140.1. NC_015580.1.

3D structure databases

ProteinModelPortaliF6ILM0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCA92322; CCA92322; PP1Y_AT14221.
KEGGinpp:PP1Y_AT14221.

Phylogenomic databases

KOiK04565.

Enzyme and pathway databases

BioCyciNSP702113:GJD2-1365-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "De novo sequencing and assembly of the whole genome of Novosphingobium sp. strain PP1Y."
    D'Argenio V., Petrillo M., Cantiello P., Naso B., Cozzuto L., Notomista E., Paolella G., Di Donato A., Salvatore F.
    J. Bacteriol. 193:4296-4296(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PP1YImported.

Entry informationi

Entry nameiF6ILM0_9SPHN
AccessioniPrimary (citable) accession number: F6ILM0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 29, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.