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F6I1W0

- F6I1W0_VITVI

UniProt

F6I1W0 - F6I1W0_VITVI

Protein

Glutamate decarboxylase

Gene

VIT_17s0000g00920

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:VIT_17s0000g00920Imported
    OrganismiVitis vinifera (Grape)Imported
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
    ProteomesiUP000009183: Chromosome 17

    Subcellular locationi

    GO - Cellular componenti

    1. plasmodesma Source: EnsemblPlants/Gramene

    PTM / Processingi

    Proteomic databases

    PRIDEiF6I1W0.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F6I1W0-1 [UniParc]FASTAAdd to Basket

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    MVISTTISDS SEHLHATFAS RYVRDPLPKF KMPERSIPKE AAFQIISDEL    50
    MLDGNPRLNL ASFVTTWMEE ECDKLIMASV NKNYVDMDEY PVTTELQNRC 100
    VNMIAHLFNA PVGENETAIG VGTVGSSEAI MLAGLAFKRK WQQKRKSEGK 150
    PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPVKAVEMVD 200
    ENTICVAAIL GSTLTGEFED VKLLNELLTK KNTETGWGTP IHVDAASGGF 250
    IAPFLHPDLE WDFRLPLVKS INVSGHKYGL VYAGVGWVVW RTKDDLPEEL 300
    IFHINYLGSD QPTFTLNFSK GSSQIIAQYY QFIRLGFEGY KNIMTNCMDN 350
    ANVLKQGLVE TGRFEIVSKD IGVPLVAFSL KDTSNYTVFD ISNNLRRYGW 400
    IIPAYTMPPD AEHIAVLRVV VREDFSRSLA ERLLSDIEKV MREMDAVQSR 450
    ATTRATHVIA TVDETREGEG EGSEKLNKKT VMENREEIAM YWKRVVDRKK 500
    TSGVC 505
    Length:505
    Mass (Da):57,126
    Last modified:July 27, 2011 - v1
    Checksum:i789290CC339752DD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN596517 Genomic DNA. Translation: CCB60927.1.
    RefSeqiXP_002263081.1. XM_002263045.2.
    UniGeneiVvi.8851.

    Genome annotation databases

    EnsemblPlantsiVIT_17s0000g00920.t01; VIT_17s0000g00920.t01; VIT_17s0000g00920.
    GeneIDi100265999.
    KEGGivvi:100265999.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN596517 Genomic DNA. Translation: CCB60927.1 .
    RefSeqi XP_002263081.1. XM_002263045.2.
    UniGenei Vvi.8851.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi F6I1W0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi VIT_17s0000g00920.t01 ; VIT_17s0000g00920.t01 ; VIT_17s0000g00920 .
    GeneIDi 100265999.
    KEGGi vvi:100265999.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
      The French-Italian Public Consortium for Grapevine Genome Characterization.
      Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
      , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
      Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Pinot noir / PN40024Imported.

    Entry informationi

    Entry nameiF6I1W0_VITVI
    AccessioniPrimary (citable) accession number: F6I1W0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3