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Protein
Submitted name:

Putative uncharacterized protein

Gene

VIT_05s0077g00280

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. beta-amylase activity Source: InterPro

GO - Biological processi

  1. polysaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:VIT_05s0077g00280Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183: Chromosome 5

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 14 family.UniRule annotation

Phylogenomic databases

InParanoidiF6HX09.
KOiK01177.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6HX09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAMSITHQM GAISGTPVVS ESGNGTAEST AALSAAAVWK LPLPAIRCRA
60 70 80 90 100
GAEIEGLSPP VSPCLSPVMG GMRADLSVAC QAFATEIEAA PAEREYRVGG
110 120 130 140 150
TKAKGKGVPV YVMMPLDSVT MGNGVNRRKA MKASMQALKS AGVEGVMMDV
160 170 180 190 200
WWGLVERDSP GTYNWGGYAE LLEMAKQHGL KVQAVMSFHQ CGGNVGDSCT
210 220 230 240 250
IPLPNWVVEE INKDPDLAYT DQWGRRNYEY VSLGSDTLPV LKGRTPVQCY
260 270 280 290 300
ADFMRAFKDN FKHLLGDTIV EIQVGMGPAG EFRYPSYPEQ DGTWKFPGIG
310 320 330 340 350
AFQCYDKYML SSLKAAAEAA GKPEWGSTGP TDAGHYNNWP EDARFFRREG
360 370 380 390 400
GGWTSPYGEF FLNWYSQMLL DHGERILSSA KSIFQDMGVK ISVKVSGIHW
410 420 430 440 450
HYGTQSHAPE LTAGYYNTRF RDGYIPIAQM LARHGAILNF TCIEMRDHEQ
460 470 480 490 500
PQDALCAPEK LVRQVALATR EAQVPLAGEN ALPRYDETAH EQILGASSLN
510 520 530 540 550
IDGEESDMCA FTYLRMNPDL FQPDNWRRFV AFVKKMKEGK DSHKCRELVE
560 570
REAEHSVHVT RPLVQEAAVA LMH
Length:573
Mass (Da):63,158
Last modified:July 27, 2011 - v1
Checksum:i836765744CDB29C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN596493 Genomic DNA. Translation: CCB59223.1.
RefSeqiXP_002285569.1. XM_002285533.2.

Genome annotation databases

EnsemblPlantsiVIT_05s0077g00280.t01; VIT_05s0077g00280.t01; VIT_05s0077g00280.
GeneIDi100242636.
KEGGivvi:100242636.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN596493 Genomic DNA. Translation: CCB59223.1.
RefSeqiXP_002285569.1. XM_002285533.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiVIT_05s0077g00280.t01; VIT_05s0077g00280.t01; VIT_05s0077g00280.
GeneIDi100242636.
KEGGivvi:100242636.

Phylogenomic databases

InParanoidiF6HX09.
KOiK01177.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024Imported.

Entry informationi

Entry nameiF6HX09_VITVI
AccessioniPrimary (citable) accession number: F6HX09
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 4, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.