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Protein
Submitted name:

Putative uncharacterized protein

Gene

VIT_01s0026g01340

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:VIT_01s0026g01340Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183 Componenti: Chromosome 1

PTM / Processingi

Proteomic databases

PRIDEiF6HPH1.

Expressioni

Gene expression databases

ExpressionAtlasiF6HPH1. differential.

Structurei

3D structure databases

ProteinModelPortaliF6HPH1.
SMRiF6HPH1. Positions 4-220.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GST superfamily.UniRule annotation

Phylogenomic databases

InParanoidiF6HPH1.
KOiK00799.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF00043. GST_C. 1 hit.
PF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6HPH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAESEIKLLG AWPSPFVMRA RIALNIKSVD YEFHQEKLGS KSQLLLESNP
60 70 80 90 100
VYKKIPVLIH DQKPICESLI IVQYVDEAWS SGPSILPSDP YDRAIARFWA
110 120 130 140 150
AYIDDKWFPS LSGLAKAQGE EAKKAAMDQV LEGFLLLEEA FGKCSKGKDF
160 170 180 190 200
FGGDRIGYLD IALGCFLGWL RVSEKMNGVK LLDAAKTPGL VGWADKFCGD
210 220 230
DAVKDVMPET DKLAEFAKIL FQAKANAPPP AN
Length:232
Mass (Da):25,630
Last modified:July 27, 2011 - v1
Checksum:iE0DCA082363137DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN596002 Genomic DNA. Translation: CCB56599.1.
RefSeqiXP_002273830.1. XM_002273794.3.

Genome annotation databases

EnsemblPlantsiVIT_01s0026g01340.t01; VIT_01s0026g01340.t01; VIT_01s0026g01340.
GeneIDi100245065.
KEGGivvi:100245065.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN596002 Genomic DNA. Translation: CCB56599.1.
RefSeqiXP_002273830.1. XM_002273794.3.

3D structure databases

ProteinModelPortaliF6HPH1.
SMRiF6HPH1. Positions 4-220.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiF6HPH1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiVIT_01s0026g01340.t01; VIT_01s0026g01340.t01; VIT_01s0026g01340.
GeneIDi100245065.
KEGGivvi:100245065.

Phylogenomic databases

InParanoidiF6HPH1.
KOiK00799.

Gene expression databases

ExpressionAtlasiF6HPH1. differential.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF00043. GST_C. 1 hit.
PF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024Imported.

Entry informationi

Entry nameiF6HPH1_VITVI
AccessioniPrimary (citable) accession number: F6HPH1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 4, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.