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F6HF90

- F6HF90_VITVI

UniProt

F6HF90 - F6HF90_VITVI

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Protein
Submitted name:

Putative uncharacterized protein

Gene
VIT_01s0011g06600
Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
  2. response to cadmium ion Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:VIT_01s0011g06600Imported
OrganismiVitis vinifera (Grape)
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: EnsemblPlants/Gramene
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliF6HF90.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F6HF90-1 [UniParc]FASTAAdd to Basket

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MVLSKTASES DVSVHSTFAS RYVKASLPRF KLPENSIPKE AAYQIINDEL    50
MLDGNPRLNL ASFVTTWMEP ECDKLMMAAI NKNYVDMDEY PVTTELQNRC 100
VNIIAHLFNA PLEDSEAAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK 150
PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLRDGYYVM DPEKAVEMVD 200
ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF 250
IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RSKEDLPEEL 300
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMENCQEN 350
AMALKEGLEK TGRFNIISKD NGVPLVAFSL KDNSCHDEFE VADMLRRFGW 400
IVPAYTMPPD AQHVTVLRVV VREDFSRTLA ERLVFDITKV LHELDMLPAK 450
LSAKISVEEK KQNGTILKKS VIETQREITD AWKKFVMAKK TNGVC 495
Length:495
Mass (Da):55,924
Last modified:July 27, 2011 - v1
Checksum:iFC102C5DD18ED49A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN595752 Genomic DNA. Translation: CCB50739.1.
RefSeqiXP_002285267.1. XM_002285231.2.
UniGeneiVvi.32665.

Genome annotation databases

EnsemblPlantsiVIT_01s0011g06600.t01; VIT_01s0011g06600.t01; VIT_01s0011g06600.
GeneIDi100266215.
KEGGivvi:100266215.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN595752 Genomic DNA. Translation: CCB50739.1 .
RefSeqi XP_002285267.1. XM_002285231.2.
UniGenei Vvi.32665.

3D structure databases

ProteinModelPortali F6HF90.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi VIT_01s0011g06600.t01 ; VIT_01s0011g06600.t01 ; VIT_01s0011g06600 .
GeneIDi 100266215.
KEGGi vvi:100266215.

Phylogenomic databases

KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024.

Entry informationi

Entry nameiF6HF90_VITVI
AccessioniPrimary (citable) accession number: F6HF90
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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