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F6HF90

- F6HF90_VITVI

UniProt

F6HF90 - F6HF90_VITVI

Protein

Glutamate decarboxylase

Gene

VIT_01s0011g06600

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro
    2. response to cadmium ion Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:VIT_01s0011g06600Imported
    OrganismiVitis vinifera (Grape)Imported
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
    ProteomesiUP000009183: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene

    Structurei

    3D structure databases

    ProteinModelPortaliF6HF90.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F6HF90-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVLSKTASES DVSVHSTFAS RYVKASLPRF KLPENSIPKE AAYQIINDEL    50
    MLDGNPRLNL ASFVTTWMEP ECDKLMMAAI NKNYVDMDEY PVTTELQNRC 100
    VNIIAHLFNA PLEDSEAAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK 150
    PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLRDGYYVM DPEKAVEMVD 200
    ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF 250
    IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RSKEDLPEEL 300
    IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMENCQEN 350
    AMALKEGLEK TGRFNIISKD NGVPLVAFSL KDNSCHDEFE VADMLRRFGW 400
    IVPAYTMPPD AQHVTVLRVV VREDFSRTLA ERLVFDITKV LHELDMLPAK 450
    LSAKISVEEK KQNGTILKKS VIETQREITD AWKKFVMAKK TNGVC 495
    Length:495
    Mass (Da):55,924
    Last modified:July 27, 2011 - v1
    Checksum:iFC102C5DD18ED49A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN595752 Genomic DNA. Translation: CCB50739.1.
    RefSeqiXP_002285267.1. XM_002285231.2.
    UniGeneiVvi.32665.

    Genome annotation databases

    EnsemblPlantsiVIT_01s0011g06600.t01; VIT_01s0011g06600.t01; VIT_01s0011g06600.
    GeneIDi100266215.
    KEGGivvi:100266215.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN595752 Genomic DNA. Translation: CCB50739.1 .
    RefSeqi XP_002285267.1. XM_002285231.2.
    UniGenei Vvi.32665.

    3D structure databases

    ProteinModelPortali F6HF90.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi VIT_01s0011g06600.t01 ; VIT_01s0011g06600.t01 ; VIT_01s0011g06600 .
    GeneIDi 100266215.
    KEGGi vvi:100266215.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
      The French-Italian Public Consortium for Grapevine Genome Characterization.
      Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
      , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
      Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Pinot noir / PN40024Imported.

    Entry informationi

    Entry nameiF6HF90_VITVI
    AccessioniPrimary (citable) accession number: F6HF90
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3