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Protein

Glutamate decarboxylase

Gene

VIT_01s0011g06610

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:VIT_01s0011g06610Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183 Componenti: Chromosome 1

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiF6HF89.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F6HF89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLSVVQGCE EESSSVVSSV FASRYVQDPP PRYKMPEKSI PKEAAYQIVH
60 70 80 90 100
DELLLDGLPR LNLATFVTTW MEPECDKLMA EAINKNYVDM DEYPVTTELQ
110 120 130 140 150
NRCVNMIAKL FNAPSADQTK QAVGVGTVGS SEAMMLAGLA FKKKWQNKRK
160 170 180 190 200
AQKKPFDKPN IVTGANVQVC WEKFARYFEV ELKEVKLREG YYVMDPVKAV
210 220 230 240 250
EMVDENTICV AAILGSTFNG EFEDVKLLNT LLTQKNKRTG WDTPIHVDAA
260 270 280 290 300
SGGFVAPFLY PELEWDFRLP LVKSINVSGH KYGLVYAGVG WAIWRSKEEL
310 320 330 340 350
PEELIFHINY LGGDEPTFTL NFSKGSSQVI AQYYQFLRMG FEGYKKVMSN
360 370 380 390 400
CMESARILRE GLEKTGRFQI ISKEKGVPVV AFAFKGNDRK NLAFGLSKAL
410 420 430 440 450
RNYGWIVPAY TMPANAENVT VLRVVVREDF GRQLVEKLLF HIGVALKEVT
460 470 480 490 500
DAASSVPMIR LTVEMKADES EMNAGEGTLH IPAASVHWKH DKPETVDTQV
510
PIMDGKTKGV C
Length:511
Mass (Da):57,302
Last modified:July 27, 2011 - v1
Checksum:iF152C5A3A43812BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN595752 Genomic DNA. Translation: CCB50738.1.
RefSeqiXP_002285268.1. XM_002285232.3.

Genome annotation databases

EnsemblPlantsiVIT_01s0011g06610.t01; VIT_01s0011g06610.t01; VIT_01s0011g06610.
GeneIDi100261008.
KEGGivvi:100261008.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN595752 Genomic DNA. Translation: CCB50738.1.
RefSeqiXP_002285268.1. XM_002285232.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiVIT_01s0011g06610.t01; VIT_01s0011g06610.t01; VIT_01s0011g06610.
GeneIDi100261008.
KEGGivvi:100261008.

Phylogenomic databases

InParanoidiF6HF89.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    The French-Italian Public Consortium for Grapevine Genome Characterization.
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024Imported.

Entry informationi

Entry nameiF6HF89_VITVI
AccessioniPrimary (citable) accession number: F6HF89
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: March 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.