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F6H088 (F6H088_VITVI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VIT_18s0001g14230 EMBL CCB46036.1
OrganismVitis vinifera (Grape) [Reference proteome]
Taxonomic identifier29760 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the hexokinase family. RuleBase RU004510

Ontologies

Keywords
   Biological processGlycolysis SAAS SAAS022672 RuleBase RU004049
   LigandATP-binding SAAS SAAS022672 RuleBase RU004049
Nucleotide-binding
   Molecular functionKinase SAAS SAAS022672 RuleBase RU004049 EMBL AFM43630.1
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglycolytic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentchloroplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

fructokinase activity

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

glucokinase activity

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6H088 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 0C2BB4635B056967

FASTA48552,463
        10         20         30         40         50         60 
MSVSAVGSFW LSPSPGKLPR PRMVVRSSAV SVAPILTHLQ KQCATPLPVL RHVADAMAAD 

        70         80         90        100        110        120 
MRAGLAVDGG SDLKMILSYV DTFPTGNEKG LFYALDLGGT NFRVLRVQLG GKDERVIATE 

       130        140        150        160        170        180 
FEQVTIPQEL MFGTSEELFD FIACGLANFA KKEGGKFHLP SGRKREIGFT FSFPVKQTSI 

       190        200        210        220        230        240 
DSGILMKWTK GFAVSGTAGR DVVACLNEAM ERQGLDMQVS ALVNDTVGTL AGARYWDDDV 

       250        260        270        280        290        300 
MVAVILGTGT NACYVERTDV IPKLQGQMSS SGRTIISTEW GAFSNGLPLT EFDRDMDAAS 

       310        320        330        340        350        360 
INPGEQIFEK TISGMYLGEI VRRVLLKMAE AGALFGEYVS EKLSTPFILR TPDICAMQQD 

       370        380        390        400        410        420 
NSDHLDAVGA ILYDVAGVKS DLSVRKMVVE VCDTIVKRGG RLAGAGIVGI LQKMEEDSKD 

       430        440        450        460        470        480 
LIFGKRTVVA MDGGLYENYP QYRRYLKEAV TELLGLEMSK NVVIEHSKDG SGIGAALLAA 


SNSKY 

« Hide

References

« Hide 'large scale' references
[1]"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
The French-Italian Public Consortium for Grapevine Genome Characterization.
Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J. expand/collapse author list , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Pinot noir / PN40024.
[2]"High quality assembly and annotation of grapevine genome."
Vitulo N., Olivier J., Forcato C., Albiero A., D'Angelo M., Zimbello R., Schiavon R., Rigobello C., Policriti A., Clepet C., Casagrande A., Choisne N., Vezzi A., Hugueney P., Horner D., Mica E., Cattonaro F., Del Fabbro C. expand/collapse author list , Alaux M., Di Gaspero G., Scalabrin S., Pesole G., Delledonne M., Pezzotti M., Pe E.M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P., Morgante M., Valle G.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Identification and structure of the hexokinase gene family in Vitis vinifera: cloning, expression and functional analysis of a putative chloroplast stromal-type hexokinase from Vitis vinifera."
Cakir B., Olcay A.C., Kilickaya O.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JQ863363 mRNA. Translation: AFM43630.1.
FN595227 Genomic DNA. Translation: CCB46036.1.
RefSeqNP_001267834.1. NM_001280905.1.
UniGeneVvi.5919.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsVIT_18s0001g14230.t01; VIT_18s0001g14230.t01; VIT_18s0001g14230.
GeneID100255753.
KEGGvvi:100255753.

Phylogenomic databases

KOK00844.

Family and domain databases

InterProIPR001312. Hexokinase.
IPR022673. Hexokinase_C.
IPR019807. Hexokinase_CS.
IPR022672. Hexokinase_N.
[Graphical view]
PANTHERPTHR19443. PTHR19443. 1 hit.
PfamPF00349. Hexokinase_1. 1 hit.
PF03727. Hexokinase_2. 1 hit.
[Graphical view]
PRINTSPR00475. HEXOKINASE.
PROSITEPS00378. HEXOKINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6H088_VITVI
AccessionPrimary (citable) accession number: F6H088
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)