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F6GID8 (F6GID8_LACS5) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Lacal_2482
OrganismLacinutrix sp. (strain 5H-3-7-4) [Complete proteome] [HAMAP] EMBL AEH02324.1
Taxonomic identifier983544 [NCBI]
Taxonomic lineageBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeLacinutrix

Protein attributes

Sequence length320 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F6GID8 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: FAB23CA913A96DA1

FASTA32036,316
        10         20         30         40         50         60 
MKTITNTNAL EQARALTQPT REASLKREPS VSHFWNSNRK LLEEAWATWE MENKDNLLIP 

        70         80         90        100        110        120 
DETLLDPKLR KAINDAWENP EKENAVADLW EEIIPGVYVA QFFDLERLAE FRKYLEDAVN 

       130        140        150        160        170        180 
SEIPKRAPYG IQLNRYGMML DERSEGHLAA PSFQAFYNDM MDRYMRPIAR LLLGTYGYDN 

       190        200        210        220        230        240 
QTFGFSIQYN PDKDKDLHAH TDASAATLNI NINLPNEVFT GSEVDFYDKA SGKTVQTIFE 

       250        260        270        280        290        300 
PGKAILHRGN VPHATHPITS GQRSNLVVWL YGDQMQIPRG STSSYGNISS NTIKDVALES 

       310        320 
VTARQRWSLP DGPKDTAAPF 

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References

[1]"Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae."
Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C., Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M., Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A. expand/collapse author list , Abe F., Horikoshi K., Keller M., Antranikian G.
J. Bacteriol. 193:4545-4546(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 5H-3-7-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002825 Genomic DNA. Translation: AEH02324.1.
RefSeqYP_004580752.1. NC_015638.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEH02324; AEH02324; Lacal_2482.
GeneID10780151.
KEGGlan:Lacal_2482.

Organism-specific databases

CMRSearch...

Enzyme and pathway databases

BioCycLSP983544:GHSZ-2522-MONOMER.

Family and domain databases

InterProIPR005123. Oxoglu/Fe-dep_dioxygenase.
[Graphical view]
PROSITEPS51471. FE2OG_OXY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6GID8_LACS5
AccessionPrimary (citable) accession number: F6GID8
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)