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F6GE03

- F6GE03_LACS5

UniProt

F6GE03 - F6GE03_LACS5

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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Lacal_0668

Organism
Lacinutrix sp. (strain 5H-3-7-4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLSP983544:GHSZ-681-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Lacal_0668Imported
OrganismiLacinutrix sp. (strain 5H-3-7-4)Imported
Taxonomic identifieri983544 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeLacinutrix
ProteomesiUP000008297: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiPRAPRFY.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

F6GE03-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKKSILLIAL SILVFGCKTD KKANQGIAEN KKKEDAKTPF VWDAANVYFL
60 70 80 90 100
LTDRFNNGDK ANDVNYGRTK ETAVLRGFEG GDLQGITQKI EDGYFTNLGI
110 120 130 140 150
NAIWMSPIVE QIHGATDEGT GNTYGFHGYW TKDWTNIDAN LGTKEDLQNL
160 170 180 190 200
VDAAHKKGIR VLLDAVINHT GPVTEQDPVW PSDWVRTDPQ CQYDNYENTV
210 220 230 240 250
TCTLVKNLPD IKTESNEAVE LPPQLVEKWK AEGRYDEEVA ELDAFFKATG
260 270 280 290 300
YPRAPRFYIM KWLSDYITDF GIDGYRVDTV KHTEAFVWQE FKDVCDNAFA
310 320 330 340 350
EFKQQNPNKV LDDNTFYLVG EVYNYGISAG KAFDFGDKKV NYFDDAFNSL
360 370 380 390 400
INFEFKWNAA QQTYEEQFKK YDSLLHTSLK GYGVLNYLTS HDDGQPFDKN
410 420 430 440 450
REKTYETATR LLLSPGAAQV YYGDESARDL TIEGTVGDAT LRSFMNWNEI
460 470 480 490 500
AYQQDLLIHW QKLGQFRRNH PSVGAGKHSM LSNTPYLFSR SYTNGNFKDE
510 520 530 540 550
VIIGIDIPKG KHTIDVSSVF KEGAQIKDFY SGEILEVTNG KITIDTESNI

LLLENIK
Length:557
Mass (Da):63,298
Last modified:July 27, 2011 - v1
Checksum:i51EFAAA4FC54733B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002825 Genomic DNA. Translation: AEH00518.1.
RefSeqiWP_013869298.1. NC_015638.1.
YP_004578946.1. NC_015638.1.

Genome annotation databases

EnsemblBacteriaiAEH00518; AEH00518; Lacal_0668.
GeneIDi10778310.
KEGGilan:Lacal_0668.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002825 Genomic DNA. Translation: AEH00518.1 .
RefSeqi WP_013869298.1. NC_015638.1.
YP_004578946.1. NC_015638.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH00518 ; AEH00518 ; Lacal_0668 .
GeneIDi 10778310.
KEGGi lan:Lacal_0668.

Phylogenomic databases

KOi K01176.
OMAi PRAPRFY.

Enzyme and pathway databases

BioCyci LSP983544:GHSZ-681-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae."
    Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C., Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M., Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A.
    , Abe F., Horikoshi K., Keller M., Antranikian G.
    J. Bacteriol. 193:4545-4546(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 5H-3-7-4Imported.

Entry informationi

Entry nameiF6GE03_LACS5
AccessioniPrimary (citable) accession number: F6GE03
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 1, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3