SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F6GE03

- F6GE03_LACS5

UniProt

F6GE03 - F6GE03_LACS5

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Alpha amylase catalytic region
Gene
Lacal_0668
Organism
Lacinutrix sp. (strain 5H-3-7-4)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciLSP983544:GHSZ-681-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Lacal_0668Imported
OrganismiLacinutrix sp. (strain 5H-3-7-4)Imported
Taxonomic identifieri983544 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeLacinutrix
ProteomesiUP000008297: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiPRAPRFY.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

F6GE03-1 [UniParc]FASTAAdd to Basket

« Hide

MKKSILLIAL SILVFGCKTD KKANQGIAEN KKKEDAKTPF VWDAANVYFL    50
LTDRFNNGDK ANDVNYGRTK ETAVLRGFEG GDLQGITQKI EDGYFTNLGI 100
NAIWMSPIVE QIHGATDEGT GNTYGFHGYW TKDWTNIDAN LGTKEDLQNL 150
VDAAHKKGIR VLLDAVINHT GPVTEQDPVW PSDWVRTDPQ CQYDNYENTV 200
TCTLVKNLPD IKTESNEAVE LPPQLVEKWK AEGRYDEEVA ELDAFFKATG 250
YPRAPRFYIM KWLSDYITDF GIDGYRVDTV KHTEAFVWQE FKDVCDNAFA 300
EFKQQNPNKV LDDNTFYLVG EVYNYGISAG KAFDFGDKKV NYFDDAFNSL 350
INFEFKWNAA QQTYEEQFKK YDSLLHTSLK GYGVLNYLTS HDDGQPFDKN 400
REKTYETATR LLLSPGAAQV YYGDESARDL TIEGTVGDAT LRSFMNWNEI 450
AYQQDLLIHW QKLGQFRRNH PSVGAGKHSM LSNTPYLFSR SYTNGNFKDE 500
VIIGIDIPKG KHTIDVSSVF KEGAQIKDFY SGEILEVTNG KITIDTESNI 550
LLLENIK 557
Length:557
Mass (Da):63,298
Last modified:July 27, 2011 - v1
Checksum:i51EFAAA4FC54733B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002825 Genomic DNA. Translation: AEH00518.1.
RefSeqiWP_013869298.1. NC_015638.1.
YP_004578946.1. NC_015638.1.

Genome annotation databases

EnsemblBacteriaiAEH00518; AEH00518; Lacal_0668.
GeneIDi10778310.
KEGGilan:Lacal_0668.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002825 Genomic DNA. Translation: AEH00518.1 .
RefSeqi WP_013869298.1. NC_015638.1.
YP_004578946.1. NC_015638.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEH00518 ; AEH00518 ; Lacal_0668 .
GeneIDi 10778310.
KEGGi lan:Lacal_0668.

Phylogenomic databases

KOi K01176.
OMAi PRAPRFY.

Enzyme and pathway databases

BioCyci LSP983544:GHSZ-681-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae."
    Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C., Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M., Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A.
    , Abe F., Horikoshi K., Keller M., Antranikian G.
    J. Bacteriol. 193:4545-4546(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 5H-3-7-4Imported.

Entry informationi

Entry nameiF6GE03_LACS5
AccessioniPrimary (citable) accession number: F6GE03
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: September 3, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi