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F6GE03

- F6GE03_LACS5

UniProt

F6GE03 - F6GE03_LACS5

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Lacal_0668

Organism
Lacinutrix sp. (strain 5H-3-7-4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciLSP983544:GHSZ-681-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Lacal_0668Imported
    OrganismiLacinutrix sp. (strain 5H-3-7-4)Imported
    Taxonomic identifieri983544 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeLacinutrix
    ProteomesiUP000008297: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.
    OMAiPRAPRFY.

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F6GE03-1 [UniParc]FASTAAdd to Basket

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    MKKSILLIAL SILVFGCKTD KKANQGIAEN KKKEDAKTPF VWDAANVYFL    50
    LTDRFNNGDK ANDVNYGRTK ETAVLRGFEG GDLQGITQKI EDGYFTNLGI 100
    NAIWMSPIVE QIHGATDEGT GNTYGFHGYW TKDWTNIDAN LGTKEDLQNL 150
    VDAAHKKGIR VLLDAVINHT GPVTEQDPVW PSDWVRTDPQ CQYDNYENTV 200
    TCTLVKNLPD IKTESNEAVE LPPQLVEKWK AEGRYDEEVA ELDAFFKATG 250
    YPRAPRFYIM KWLSDYITDF GIDGYRVDTV KHTEAFVWQE FKDVCDNAFA 300
    EFKQQNPNKV LDDNTFYLVG EVYNYGISAG KAFDFGDKKV NYFDDAFNSL 350
    INFEFKWNAA QQTYEEQFKK YDSLLHTSLK GYGVLNYLTS HDDGQPFDKN 400
    REKTYETATR LLLSPGAAQV YYGDESARDL TIEGTVGDAT LRSFMNWNEI 450
    AYQQDLLIHW QKLGQFRRNH PSVGAGKHSM LSNTPYLFSR SYTNGNFKDE 500
    VIIGIDIPKG KHTIDVSSVF KEGAQIKDFY SGEILEVTNG KITIDTESNI 550
    LLLENIK 557
    Length:557
    Mass (Da):63,298
    Last modified:July 27, 2011 - v1
    Checksum:i51EFAAA4FC54733B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002825 Genomic DNA. Translation: AEH00518.1.
    RefSeqiWP_013869298.1. NC_015638.1.
    YP_004578946.1. NC_015638.1.

    Genome annotation databases

    EnsemblBacteriaiAEH00518; AEH00518; Lacal_0668.
    GeneIDi10778310.
    KEGGilan:Lacal_0668.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002825 Genomic DNA. Translation: AEH00518.1 .
    RefSeqi WP_013869298.1. NC_015638.1.
    YP_004578946.1. NC_015638.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEH00518 ; AEH00518 ; Lacal_0668 .
    GeneIDi 10778310.
    KEGGi lan:Lacal_0668.

    Phylogenomic databases

    KOi K01176.
    OMAi PRAPRFY.

    Enzyme and pathway databases

    BioCyci LSP983544:GHSZ-681-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae."
      Klippel B., Lochner A., Bruce D.C., Walston Davenport K., Detter C., Goodwin L.A., Han J., Han S., Hauser L., Land M.L., Nolan M., Ovchinnikova G., Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A.
      , Abe F., Horikoshi K., Keller M., Antranikian G.
      J. Bacteriol. 193:4545-4546(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 5H-3-7-4Imported.

    Entry informationi

    Entry nameiF6GE03_LACS5
    AccessioniPrimary (citable) accession number: F6GE03
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3