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F6FW08 (F6FW08_ISOV2) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Isova_1729 EMBL AEG44478.1
OrganismIsoptericola variabilis (strain 225) [Complete proteome] [HAMAP]
Taxonomic identifier743718 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeIsoptericola

Protein attributes

Sequence length329 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL AEG44478.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionisomerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6FW08 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 811073693B2C3DA7

FASTA32936,898
        10         20         30         40         50         60 
MSQPRFGAGL WHFASYVDRY AVDGYAPPVT TLEAIARAGE VGDLSVVDLN YPFTPGVGLD 

        70         80         90        100        110        120 
EVKDALKEAG LAAIGITPEI YLRKFGRGAF TNPDKAVRHA TYDLIDEAAG VVRELGADYV 

       130        140        150        160        170        180 
KVWPGQDGWD YPFQVNHHDL WKLAVDGIRQ VASPHPDLKF AIEYKPREPR VKMTWDSAAR 

       190        200        210        220        230        240 
SILGIQQTGL DNVGVLLDFG HSLYGGESPA DAAQLLIDHG LLYGMDVNDN LRSWDDDLMV 

       250        260        270        280        290        300 
GTVHLTEIFE FFYTLRINNW DGVWQLDQFP FREDTVDTAR TSIRFLKALH RALDELDYDG 

       310        320 
LREAQERQDP IAAQRLVQDA LLSCMRSDK 

« Hide

References

[1]"Complete sequence of Isoptericola variabilis 225."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Zeytun A., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Siebers A., Allgaier M. expand/collapse author list , Thelen M., Hugenholtz P., Gladden J., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 225.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002810 Genomic DNA. Translation: AEG44478.1.
RefSeqYP_004542372.1. NC_015588.1.

3D structure databases

ProteinModelPortalF6FW08.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG44478; AEG44478; Isova_1729.
GeneID10733344.
KEGGiva:Isova_1729.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Enzyme and pathway databases

BioCycIVAR743718:GI39-1756-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMSSF51658. SSF51658. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6FW08_ISOV2
AccessionPrimary (citable) accession number: F6FW08
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)