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F6FVH2

- F6FVH2_ISOV2

UniProt

F6FVH2 - F6FVH2_ISOV2

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Isova_1647

Organism
Isoptericola variabilis (strain 225)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciIVAR743718:GI39-1674-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Isova_1647Imported
    OrganismiIsoptericola variabilis (strain 225)Imported
    Taxonomic identifieri743718 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeIsoptericola
    ProteomesiUP000009236: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF6FVH2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 2 hits.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6FVH2-1 [UniParc]FASTAAdd to Basket

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    MSLPLQPPIL PMLAKSVPEV PEQPDGDAQW VYEPKWDGFR AIVYRDGDDV    50
    RIDSRNARPM QRYFPEVVAA VLDALPERCV VDGEIVVARP DPGPGPARLD 100
    FDALSQRIHP AESRVRLLAE QTPASLVVFD VLALGDDDLS RRPLAERLDA 150
    LDGLGLSGPH VFATPRTHDT AVAREWFEAF EGAGLDGVVA KRLDGRYEPN 200
    KRTLLKIKHA RTADVVLAGY RLHKTSTPAE PLIGSLLLGL YDGDEDGDPG 250
    QLQFVGVAAS FPAARRAALH AELAPLVVEP GTPEHEAHPW ADWQDPAVAD 300
    GTAGERRPGA QSRWSAGKDL SFTPLRVERV LEVGYDHMEG TRFRHTAQFK 350
    RWRPDRDPTS CTYAQLEEPV RYDLGSLLPG APGTA 385
    Length:385
    Mass (Da):42,262
    Last modified:July 27, 2011 - v1
    Checksum:iAB4DC7C3B82183F9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002810 Genomic DNA. Translation: AEG44399.1.
    RefSeqiYP_004542293.1. NC_015588.1.

    Genome annotation databases

    EnsemblBacteriaiAEG44399; AEG44399; Isova_1647.
    GeneIDi10733262.
    KEGGiiva:Isova_1647.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002810 Genomic DNA. Translation: AEG44399.1 .
    RefSeqi YP_004542293.1. NC_015588.1.

    3D structure databases

    ProteinModelPortali F6FVH2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEG44399 ; AEG44399 ; Isova_1647 .
    GeneIDi 10733262.
    KEGGi iva:Isova_1647.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci IVAR743718:GI39-1674-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 2 hits.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 225Imported.

    Entry informationi

    Entry nameiF6FVH2_ISOV2
    AccessioniPrimary (citable) accession number: F6FVH2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3