SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F6FVH2

- F6FVH2_ISOV2

UniProt

F6FVH2 - F6FVH2_ISOV2

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: ATP dependent DNA ligase
Gene
Isova_1647
Organism
Isoptericola variabilis (strain 225)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciIVAR743718:GI39-1674-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Isova_1647Imported
OrganismiIsoptericola variabilis (strain 225)
Taxonomic identifieri743718 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeIsoptericola
ProteomesiUP000009236: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6FVH2.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6FVH2-1 [UniParc]FASTAAdd to Basket

« Hide

MSLPLQPPIL PMLAKSVPEV PEQPDGDAQW VYEPKWDGFR AIVYRDGDDV    50
RIDSRNARPM QRYFPEVVAA VLDALPERCV VDGEIVVARP DPGPGPARLD 100
FDALSQRIHP AESRVRLLAE QTPASLVVFD VLALGDDDLS RRPLAERLDA 150
LDGLGLSGPH VFATPRTHDT AVAREWFEAF EGAGLDGVVA KRLDGRYEPN 200
KRTLLKIKHA RTADVVLAGY RLHKTSTPAE PLIGSLLLGL YDGDEDGDPG 250
QLQFVGVAAS FPAARRAALH AELAPLVVEP GTPEHEAHPW ADWQDPAVAD 300
GTAGERRPGA QSRWSAGKDL SFTPLRVERV LEVGYDHMEG TRFRHTAQFK 350
RWRPDRDPTS CTYAQLEEPV RYDLGSLLPG APGTA 385
Length:385
Mass (Da):42,262
Last modified:July 27, 2011 - v1
Checksum:iAB4DC7C3B82183F9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002810 Genomic DNA. Translation: AEG44399.1.
RefSeqiYP_004542293.1. NC_015588.1.

Genome annotation databases

EnsemblBacteriaiAEG44399; AEG44399; Isova_1647.
GeneIDi10733262.
KEGGiiva:Isova_1647.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002810 Genomic DNA. Translation: AEG44399.1 .
RefSeqi YP_004542293.1. NC_015588.1.

3D structure databases

ProteinModelPortali F6FVH2.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG44399 ; AEG44399 ; Isova_1647 .
GeneIDi 10733262.
KEGGi iva:Isova_1647.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci IVAR743718:GI39-1674-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 2 hits.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 225.

Entry informationi

Entry nameiF6FVH2_ISOV2
AccessioniPrimary (citable) accession number: F6FVH2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi