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F6FVH2

- F6FVH2_ISOV2

UniProt

F6FVH2 - F6FVH2_ISOV2

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Isova_1647

Organism
Isoptericola variabilis (strain 225)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciIVAR743718:GI39-1674-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Isova_1647Imported
OrganismiIsoptericola variabilis (strain 225)Imported
Taxonomic identifieri743718 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeIsoptericola
ProteomesiUP000009236: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6FVH2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6FVH2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSLPLQPPIL PMLAKSVPEV PEQPDGDAQW VYEPKWDGFR AIVYRDGDDV
60 70 80 90 100
RIDSRNARPM QRYFPEVVAA VLDALPERCV VDGEIVVARP DPGPGPARLD
110 120 130 140 150
FDALSQRIHP AESRVRLLAE QTPASLVVFD VLALGDDDLS RRPLAERLDA
160 170 180 190 200
LDGLGLSGPH VFATPRTHDT AVAREWFEAF EGAGLDGVVA KRLDGRYEPN
210 220 230 240 250
KRTLLKIKHA RTADVVLAGY RLHKTSTPAE PLIGSLLLGL YDGDEDGDPG
260 270 280 290 300
QLQFVGVAAS FPAARRAALH AELAPLVVEP GTPEHEAHPW ADWQDPAVAD
310 320 330 340 350
GTAGERRPGA QSRWSAGKDL SFTPLRVERV LEVGYDHMEG TRFRHTAQFK
360 370 380
RWRPDRDPTS CTYAQLEEPV RYDLGSLLPG APGTA
Length:385
Mass (Da):42,262
Last modified:July 27, 2011 - v1
Checksum:iAB4DC7C3B82183F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002810 Genomic DNA. Translation: AEG44399.1.
RefSeqiWP_013838791.1. NC_015588.1.
YP_004542293.1. NC_015588.1.

Genome annotation databases

EnsemblBacteriaiAEG44399; AEG44399; Isova_1647.
GeneIDi10733262.
KEGGiiva:Isova_1647.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002810 Genomic DNA. Translation: AEG44399.1 .
RefSeqi WP_013838791.1. NC_015588.1.
YP_004542293.1. NC_015588.1.

3D structure databases

ProteinModelPortali F6FVH2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG44399 ; AEG44399 ; Isova_1647 .
GeneIDi 10733262.
KEGGi iva:Isova_1647.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci IVAR743718:GI39-1674-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 2 hits.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 225Imported.

Entry informationi

Entry nameiF6FVH2_ISOV2
AccessioniPrimary (citable) accession number: F6FVH2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 29, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3