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F6FQ99 (F6FQ99_ISOV2) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL AEG42852.1
Gene names
Ordered Locus Names:Isova_0034 EMBL AEG42852.1
OrganismIsoptericola variabilis (strain 225) [Complete proteome] [HAMAP]
Taxonomic identifier743718 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaePromicromonosporaceaeIsoptericola

Protein attributes

Sequence length527 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F6FQ99 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 5A9F1A54E73E1E41

FASTA52759,012
        10         20         30         40         50         60 
MTISPSWYGN AVIYQVDPRL FYDADGDGWG DLPGVIERLP YLRGLGTTAV WLLPFYVSPF 

        70         80         90        100        110        120 
RDGGYDVVDH LAVDPRLGDL ADVARLLETA DDMGIHVIVE LVCQHTSDQH RWFQDARSSR 

       130        140        150        160        170        180 
TSRYRDYYVW SDEPVKTGVE PMFPEVEDDV WTWDSEAQQF YRHTFYSFEP DLALDNPRVR 

       190        200        210        220        230        240 
DELERIMTFW LRLGVSGFRV DAVPYMVERA RQADPAEDGQ WLVRQMRDVV TRQNAGAVLL 

       250        260        270        280        290        300 
GEADVEPLLW ALDQQPDPPR HGQYAQWLRN NDELDLERLS DAERAEVLEA FAPQRRMQVY 

       310        320        330        340        350        360 
GRGIRRRLAP MLDGDARRIA LAHAVLFSLP GPPILRYGDE IGMGDDLARS EREAVRTPMQ 

       370        380        390        400        410        420 
WTDGRNAGFS QADPDDLVAP VISHGPYAYT RVNVADQAVH GGSLHNRVGA LIRARLGLPE 

       430        440        450        460        470        480 
TGLVRPEPVE VTGADGRPAT SVLALRYAHG SSCVVMLANL ADADVEVTLD ADPPVDAALV 

       490        500        510        520 
DVLADQAYDR AKPVRGGGGA VRPRVRLAGY GYRWLRPRDR AVHDAPG 

« Hide

References

[1]"Complete sequence of Isoptericola variabilis 225."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Zeytun A., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Siebers A., Allgaier M. expand/collapse author list , Thelen M., Hugenholtz P., Gladden J., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 225.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002810 Genomic DNA. Translation: AEG42852.1.
RefSeqYP_004540746.1. NC_015588.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG42852; AEG42852; Isova_0034.
GeneID10731625.
KEGGiva:Isova_0034.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Enzyme and pathway databases

BioCycIVAR743718:GI39-37-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 4 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6FQ99_ISOV2
AccessionPrimary (citable) accession number: F6FQ99
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)