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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Sphch_0779

Organism
Sphingobium chlorophenolicum L-1
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciSCHL690566:G1GN4-786-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
ORF Names:Sphch_0779Imported
OrganismiSphingobium chlorophenolicum L-1Imported
Taxonomic identifieri690566 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
Proteomesi
  • UP000007150 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi690566.Sphch_0779

Structurei

3D structure databases

ProteinModelPortaliF6EZW2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini303 – 433DNA_LIGASE_A3InterPro annotationAdd BLAST131

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
KOiK10747
OrthoDBiPOG091H09SJ

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

F6EZW2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAFSQLLDG LVYTRSRNGK LDLIAAYMRS APDPDRGWAL AALTGNLDLK
60 70 80 90 100
AVKASTIAEM TRARVDPVLF EMSRDYVGDL AETVALLWPK AEDQPPEVDD
110 120 130 140 150
GSLTLSAIID RLHATSRAAA PATLARMMDH LDASGRFALL KLATGGLRVG
160 170 180 190 200
ISARLAKTGF AQAFNLDVDD VEECWHALAP PYAALFQWAE GKADRPDPAG
210 220 230 240 250
TPFFRPFMLA HPLEAESVDL TDYAAEWKWD GIRVQIVGTP NETRLYSRAG
260 270 280 290 300
DDITGSFPDI AQALRHHAVL DGELLVKGEF QGGEAASFNA LQQRLGRKAV
310 320 330 340 350
TAKMMDEYPA FVRLYDILLD ADEDLRPLAW EQRRARLEAI VPQLDPHRFD
360 370 380 390 400
LSALIEAPDF DTLADIRAGA RDAAIEGVML KRRDSPYVAG RRAALWYKWK
410 420 430 440 450
RDPLTADCVM MYAQRGHGKR SSFYSDYTFG CWTEEGELLP VGKAYSGFTD
460 470 480 490 500
EELKWLDRFV RTNTVNRFGP VREVEKSLVL EVAFDSIHDS KRHKSGLAMR
510 520
FPRISRIRRD KPAQEADTVA GLRRLIS
Length:527
Mass (Da):58,841
Last modified:July 27, 2011 - v1
Checksum:i105A81DA66BDDB45
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002798 Genomic DNA Translation: AEG48473.1
RefSeqiWP_013846738.1, NC_015593.1

Genome annotation databases

EnsemblBacteriaiAEG48473; AEG48473; Sphch_0779
GeneIDi35852904
KEGGisch:Sphch_0779

Similar proteinsi

Entry informationi

Entry nameiF6EZW2_SPHCR
AccessioniPrimary (citable) accession number: F6EZW2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 25, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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