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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Sphingobium chlorophenolicum L-1
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei137 – 1371UniRule annotation
Active sitei565 – 5651UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciSCHL690566:GJJA-2479-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
ORF Names:Sphch_2430Imported
OrganismiSphingobium chlorophenolicum L-1Imported
Taxonomic identifieri690566 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
ProteomesiUP000007150 Componenti: Chromosome 1

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6EYN8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATPAPSSAP AITQNPDIRY LGRLLGDVIR AYGGEKIYKQ TEYIRSASVD
60 70 80 90 100
RARGLHGADV VDTGLDALSL DDTLSFVRGF MLFSMLANLA EDRQGVAAEP
110 120 130 140 150
GADVASAVEK LDSHGIGREA VLDLLSHALI VPVLTAHPTE VRRKSMIDHK
160 170 180 190 200
NRIADLMLLK DGGRTETDEG ENLDEAIFRQ IALLWQTRPL RREKLFVADE
210 220 230 240 250
IENVLAYFRD VFLPVLPALY ARWERVLGAR PQSFLRVGNW IGGDRDGNPF
260 270 280 290 300
VQAPQLRLAL AKGCEAALTF YMGALHALGA ELSLSTELAH VPQSVLDLAD
310 320 330 340 350
ASGDNSPSRQ DEPYRRAISG IYARLAATYQ ALIGKNPSRP STLKGQAYAI
360 370 380 390 400
PADLRRDLVT VAQGLASEGG GALASGGALG RLIRAVETFG FHLATLDMRQ
410 420 430 440 450
NSDVHQSVVA ELLKVAGVEA DYAALDEYAR IALLRRELAN NRPLGTRFSE
460 470 480 490 500
YSEQTASELA IVHAAAEAHR VYGPQCITHY IISKAESVSD LLEVNIILKE
510 520 530 540 550
AGLWRIGADG APQAAIMAVP LFETIADLEA APSIMTAYFG LPEIAGVVRG
560 570 580 590 600
RGHQEVMIGY SDSNKDGGYI TSTWGLFQAS KALAPVFADA GTAMQLFHGR
610 620 630 640 650
GGAVGRGGGS SFAAIQAQPK GTVQGRIRIT EQGEVIAAKF GTRDVAMTNL
660 670 680 690 700
EAMTSATLLA SLEPEAISDR DAARFAAAMD QLSKTAFAAY RDLVYGTEGF
710 720 730 740 750
KEFFRQLTPI QEISGLKIGS RPASRTKSTR IEDLRAIPWV FSWAQARVML
760 770 780 790 800
PGWYGVGHAL SAFEDKVLLA DMAQHWSFLQ SALANLEMVL AKSDLGIAAH
810 820 830 840 850
YLPLVEDQAR GAEIFDRIRD GWDKTHDGLL AATGQSRLLE KNPKLDSSIR
860 870 880 890
LRLPYIEPLN LLQVELMKRH RSGEDDPRIK EGIELSINAI ATALRNSG
Length:898
Mass (Da):97,392
Last modified:July 27, 2011 - v1
Checksum:iD1149E689253FF84
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002798 Genomic DNA. Translation: AEG50088.1.
RefSeqiWP_013848328.1. NC_015593.1.
YP_004554594.1. NC_015593.1.

Genome annotation databases

EnsemblBacteriaiAEG50088; AEG50088; Sphch_2430.
KEGGisch:Sphch_2430.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002798 Genomic DNA. Translation: AEG50088.1.
RefSeqiWP_013848328.1. NC_015593.1.
YP_004554594.1. NC_015593.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEG50088; AEG50088; Sphch_2430.
KEGGisch:Sphch_2430.

Phylogenomic databases

KOiK01595.

Enzyme and pathway databases

BioCyciSCHL690566:GJJA-2479-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Sphingobium chlorophenolicum L-1."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Daligault H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Turner P., Copley S., Woyke T.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: L-1Imported.

Entry informationi

Entry nameiF6EYN8_SPHCR
AccessioniPrimary (citable) accession number: F6EYN8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 27, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.