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Protein
Submitted name:

Superoxide dismutase copper/zinc binding protein

Gene

Sphch_0218

Organism
Sphingobium chlorophenolicum L-1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: InterPro

GO - Biological processi

  1. oxidation-reduction process Source: InterPro
  2. superoxide metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSCHL690566:GJJA-218-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase copper/zinc binding proteinImported
Gene namesi
ORF Names:Sphch_0218Imported
OrganismiSphingobium chlorophenolicum L-1Imported
Taxonomic identifieri690566 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
ProteomesiUP000007150 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PotentialImportedAdd
BLAST
Chaini27 – 183157 PotentialImportedPRO_5000753327Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliF6EUZ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

F6EUZ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIAAIIIAL PMAVMASGCA TGSSADAPVA NAPAPVAHAR LLAGDGYARG
60 70 80 90 100
EATVTQATDG LHVLVRAQGL TPGMHAVHVH TVGSCTPPDF ASAGGHWNPT
110 120 130 140 150
GHKHGRDNPD GMHMGDMPNM IAGADGVGEM EYVISGGTIS AGATPLLDSD
160 170 180
GAAVVIHAQA DDNKTDPAGN AGGRVACGVL SAG
Length:183
Mass (Da):18,015
Last modified:July 27, 2011 - v1
Checksum:iF891AB9AEF13AAB7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002798 Genomic DNA. Translation: AEG47918.1.
RefSeqiWP_013846191.1. NC_015593.1.
YP_004552424.1. NC_015593.1.

Genome annotation databases

EnsemblBacteriaiAEG47918; AEG47918; Sphch_0218.
KEGGisch:Sphch_0218.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002798 Genomic DNA. Translation: AEG47918.1.
RefSeqiWP_013846191.1. NC_015593.1.
YP_004552424.1. NC_015593.1.

3D structure databases

ProteinModelPortaliF6EUZ4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEG47918; AEG47918; Sphch_0218.
KEGGisch:Sphch_0218.

Phylogenomic databases

KOiK04565.

Enzyme and pathway databases

BioCyciSCHL690566:GJJA-218-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Sphingobium chlorophenolicum L-1."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Daligault H., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Turner P., Copley S., Woyke T.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: L-1Imported.

Entry informationi

Entry nameiF6EUZ4_SPHCR
AccessioniPrimary (citable) accession number: F6EUZ4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 29, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.