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Protein
Submitted name:

4-aminobutyrate transaminase

Gene

gabT2

Organism
Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciASUB443218:GH9R-3643-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate transaminaseImported
Gene namesi
Name:gabT2Imported
Ordered Locus Names:AS9A_3606Imported
OrganismiAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)Imported
Taxonomic identifieri443218 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeAmycolicicoccus
ProteomesiUP000009235 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6ES40.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.
OMAiQSEVLMH.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6ES40-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRISPLLKQ ATPVTVDHGE GCYLYGTDGR RYLDFTAGIG VTSTGHCHPR
60 70 80 90 100
VVEAARAQVG SLIHGQYTTV MHKPMLELVE KLGEVLPEGL DSLFFSNSGS
110 120 130 140 150
EAVEAALRLA RQATGRPNVI VFHGGFHGRT VAAASMTTSG TRFSAGFSPL
160 170 180 190 200
MAGVHVAPFP TAFRWGWSEE EATDFALREL DYLFATISSP KETAAFIVEP
210 220 230 240 250
VLGEGGYVPG NTRFFQGLRE RADQHGIVLI LDEIQTGFGR TGKFFGHQHF
260 270 280 290 300
DIKPDVITIA KGLASGFPLS GIAAPEALMA KAWPGSQGGT YGGNAVACAA
310 320 330 340 350
AVATIDVIRD EGLVDNAAQR GTQLLHGAAN LATKAIGDTR GLGLLVGSEF
360 370 380 390 400
VDENGKPDGT KAAAAQQLAG KKGLLLLMCG AYMNTVRMIP PLIVTSEQID
410
EGLSIWEEVL AEI
Length:413
Mass (Da):43,738
Last modified:July 27, 2011 - v1
Checksum:iD5D50F4AC52F7855
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002786 Genomic DNA. Translation: AEF42044.1.
RefSeqiYP_004494844.1. NC_015564.1.

Genome annotation databases

EnsemblBacteriaiAEF42044; AEF42044; AS9A_3606.
KEGGiasd:AS9A_3606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002786 Genomic DNA. Translation: AEF42044.1.
RefSeqiYP_004494844.1. NC_015564.1.

3D structure databases

ProteinModelPortaliF6ES40.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF42044; AEF42044; AS9A_3606.
KEGGiasd:AS9A_3606.

Phylogenomic databases

KOiK00823.
OMAiQSEVLMH.

Enzyme and pathway databases

BioCyciASUB443218:GH9R-3643-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
    Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
    J. Bacteriol. 193:4538-4539(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 45089 / DQS3-9A1Imported.

Entry informationi

Entry nameiF6ES40_AMYSD
AccessioniPrimary (citable) accession number: F6ES40
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 1, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.