F6ES40 (F6ES40_AMYSD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate transaminase EMBL AEF42044.1

Gene names

Name:	gabT2 EMBL AEF42044.1
Ordered Locus Names:	AS9A_3606 EMBL AEF42044.1

Organism

Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) [Complete proteome] [HAMAP]

Taxonomic identifier

443218 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Amycolicicoccus › Amycolicicoccus subflavus

Protein attributes

Sequence length	413 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6ES40 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: D5D50F4AC52F7855	FASTA	413	43,738
	10 20 30 40 50 60 MTRISPLLKQ ATPVTVDHGE GCYLYGTDGR RYLDFTAGIG VTSTGHCHPR VVEAARAQVG 70 80 90 100 110 120 SLIHGQYTTV MHKPMLELVE KLGEVLPEGL DSLFFSNSGS EAVEAALRLA RQATGRPNVI 130 140 150 160 170 180 VFHGGFHGRT VAAASMTTSG TRFSAGFSPL MAGVHVAPFP TAFRWGWSEE EATDFALREL 190 200 210 220 230 240 DYLFATISSP KETAAFIVEP VLGEGGYVPG NTRFFQGLRE RADQHGIVLI LDEIQTGFGR 250 260 270 280 290 300 TGKFFGHQHF DIKPDVITIA KGLASGFPLS GIAAPEALMA KAWPGSQGGT YGGNAVACAA 310 320 330 340 350 360 AVATIDVIRD EGLVDNAAQR GTQLLHGAAN LATKAIGDTR GLGLLVGSEF VDENGKPDGT 370 380 390 400 410 KAAAAQQLAG KKGLLLLMCG AYMNTVRMIP PLIVTSEQID EGLSIWEEVL AEI

References

[1]

"Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil." Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L. J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 45089 / DQS3-9A1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002786 Genomic DNA. Translation: AEF42044.1.
RefSeq	YP_004494844.1. NC_015564.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEF42044; AEF42044; AS9A_3606.
GeneID	10635773.
KEGG	asd:AS9A_3606.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00823.
Enzyme and pathway databases
BioCyc	ASUB443218:GH9R-3643-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6ES40_AMYSD

Accession

Primary (citable) accession number: F6ES40

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)