F6EQQ1 (F6EQQ1_AMYSD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptidyl-tRNA hydrolase HAMAP-Rule MF_00083
Short name=PTH HAMAP-Rule MF_00083
EC=3.1.1.29 HAMAP-Rule MF_00083

Gene names

Name:	pth HAMAP-Rule MF_00083
Ordered Locus Names:	AS9A_3488 EMBL AEF41928.1

Organism

Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) [Complete proteome] [HAMAP]

Taxonomic identifier

443218 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Amycolicicoccus › Amycolicicoccus subflavus

Protein attributes

Sequence length	189 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP-Rule MF_00083
Catalytic activity	N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP-Rule MF_00083 RuleBase RU000673
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00083
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00083.
Sequence similarities	Belongs to the PTH family. HAMAP-Rule MF_00083 RuleBase RU004320

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP-Rule MF_00083
Molecular function	Hydrolase HAMAP-Rule MF_00083 RuleBase RU000673 EMBL AEF41928.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6EQQ1 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 2E6E83850B977909	FASTA	189	20,295
	10 20 30 40 50 60 MTFVVAGLGN PGTQYATTRH NVGYLVADVL AARYGARFSG QKRTRADLAE VRLSGVKVVL 70 80 90 100 110 120 AKPHTYMNLS GGPISATAKF FSVPPENVIA VHDDLDLDFG VVRLKRAGGE GGHNGLRSLT 130 140 150 160 170 180 AHLHTRDYLR VRLGVGRPPG QMAAASYVLK PFSATERKEL GVIVEEAADA LELLIELGLE AAQNRVHAR

References

[1]

"Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil." Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L. J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 45089 / DQS3-9A1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002786 Genomic DNA. Translation: AEF41928.1.
RefSeq	YP_004494728.1. NC_015564.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEF41928; AEF41928; AS9A_3488.
GeneID	10635656.
KEGG	asd:AS9A_3488.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01056.
Enzyme and pathway databases
BioCyc	ASUB443218:GH9R-3524-MONOMER.
Family and domain databases
Gene3D	3.40.50.1470. 1 hit.
HAMAP	MF_00083. Pept_tRNA_hydro_bact.
InterPro	IPR001328. Pept_tRNA_hydro. IPR018171. Pept_tRNA_hydro_CS. [Graphical view]
PANTHER	PTHR17224. PTHR17224. 1 hit.
Pfam	PF01195. Pept_tRNA_hydro. 1 hit. [Graphical view]
SUPFAM	SSF53178. Pept_tRNA_hydro. 1 hit.
TIGRFAMs	TIGR00447. pth. 1 hit.
PROSITE	PS01195. PEPT_TRNA_HYDROL_1. 1 hit. PS01196. PEPT_TRNA_HYDROL_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6EQQ1_AMYSD

Accession

Primary (citable) accession number: F6EQQ1

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)