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F6EKA8 (F6EKA8_AMYSD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:AS9A_4216 EMBL AEF42649.1
OrganismAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) [Complete proteome] [HAMAP] EMBL AEF42649.1
Taxonomic identifier443218 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeAmycolicicoccus

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6EKA8 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 616A4DFDCA6C5F01

FASTA30434,866
        10         20         30         40         50         60 
MELEVGDRVI KLSSPDRVYF TQRGETKLDL AKYYMSVGDG IVRALRERPC MLHRFPDGVD 

        70         80         90        100        110        120 
GQKVHQKRLP RGAPPWVETV RLHFPRYNRT ADELCVTELG SVIWAVQMST VEFHPWNSRR 

       130        140        150        160        170        180 
ADTEKPDEWR IDLDPMPKCP FSKVRRAAEV SHEILEELGA VGWPKTSGGH GLHIYVRIKP 

       190        200        210        220        230        240 
EHGFAEVRRA ALAFAREVER RLPDDVTTAW WRRDRSPSDL FVDYNQNARD HTIAAAYSVR 

       250        260        270        280        290        300 
GNPRGTVSAP LKWDEIPDAE PNDFTIASMP DRFAKFGDLH EGIDDAVFDL QPLLEWADRD 


GLEQ 

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References

[1]"Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 45089 / DQS3-9A1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002786 Genomic DNA. Translation: AEF42649.1.
RefSeqYP_004495449.1. NC_015564.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF42649; AEF42649; AS9A_4216.
GeneID10636381.
KEGGasd:AS9A_4216.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAPDEWRID.

Enzyme and pathway databases

BioCycASUB443218:GH9R-4255-MONOMER.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6EKA8_AMYSD
AccessionPrimary (citable) accession number: F6EKA8
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)