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F6EKA8

- F6EKA8_AMYSD

UniProt

F6EKA8 - F6EKA8_AMYSD

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Protein
Submitted name: DNA polymerase LigD, polymerase domain protein
Gene
AS9A_4216
Organism
Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Enzyme and pathway databases

    BioCyciASUB443218:GH9R-4255-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, polymerase domain proteinImported
    Gene namesi
    Ordered Locus Names:AS9A_4216Imported
    OrganismiAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)Imported
    Taxonomic identifieri443218 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeAmycolicicoccus
    ProteomesiUP000009235: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiPDEWRID.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F6EKA8-1 [UniParc]FASTAAdd to Basket

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    MELEVGDRVI KLSSPDRVYF TQRGETKLDL AKYYMSVGDG IVRALRERPC    50
    MLHRFPDGVD GQKVHQKRLP RGAPPWVETV RLHFPRYNRT ADELCVTELG 100
    SVIWAVQMST VEFHPWNSRR ADTEKPDEWR IDLDPMPKCP FSKVRRAAEV 150
    SHEILEELGA VGWPKTSGGH GLHIYVRIKP EHGFAEVRRA ALAFAREVER 200
    RLPDDVTTAW WRRDRSPSDL FVDYNQNARD HTIAAAYSVR GNPRGTVSAP 250
    LKWDEIPDAE PNDFTIASMP DRFAKFGDLH EGIDDAVFDL QPLLEWADRD 300
    GLEQ 304
    Length:304
    Mass (Da):34,866
    Last modified:July 27, 2011 - v1
    Checksum:i616A4DFDCA6C5F01
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002786 Genomic DNA. Translation: AEF42649.1.
    RefSeqiYP_004495449.1. NC_015564.1.

    Genome annotation databases

    EnsemblBacteriaiAEF42649; AEF42649; AS9A_4216.
    GeneIDi10636381.
    KEGGiasd:AS9A_4216.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002786 Genomic DNA. Translation: AEF42649.1 .
    RefSeqi YP_004495449.1. NC_015564.1.

    3D structure databases

    ModBasei Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEF42649 ; AEF42649 ; AS9A_4216 .
    GeneIDi 10636381.
    KEGGi asd:AS9A_4216.

    Phylogenomic databases

    KOi K01971.
    OMAi PDEWRID.

    Enzyme and pathway databases

    BioCyci ASUB443218:GH9R-4255-MONOMER.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
      Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
      J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 45089 / DQS3-9A1.

    Entry informationi

    Entry nameiF6EKA8_AMYSD
    AccessioniPrimary (citable) accession number: F6EKA8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 16, 2013
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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