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F6EKA8

- F6EKA8_AMYSD

UniProt

F6EKA8 - F6EKA8_AMYSD

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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene
AS9A_4216
Organism
Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciASUB443218:GH9R-4255-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:AS9A_4216Imported
OrganismiAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)Imported
Taxonomic identifieri443218 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeAmycolicicoccus
ProteomesiUP000009235: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiPDEWRID.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

F6EKA8-1 [UniParc]FASTAAdd to Basket

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MELEVGDRVI KLSSPDRVYF TQRGETKLDL AKYYMSVGDG IVRALRERPC    50
MLHRFPDGVD GQKVHQKRLP RGAPPWVETV RLHFPRYNRT ADELCVTELG 100
SVIWAVQMST VEFHPWNSRR ADTEKPDEWR IDLDPMPKCP FSKVRRAAEV 150
SHEILEELGA VGWPKTSGGH GLHIYVRIKP EHGFAEVRRA ALAFAREVER 200
RLPDDVTTAW WRRDRSPSDL FVDYNQNARD HTIAAAYSVR GNPRGTVSAP 250
LKWDEIPDAE PNDFTIASMP DRFAKFGDLH EGIDDAVFDL QPLLEWADRD 300
GLEQ 304
Length:304
Mass (Da):34,866
Last modified:July 27, 2011 - v1
Checksum:i616A4DFDCA6C5F01
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002786 Genomic DNA. Translation: AEF42649.1.
RefSeqiYP_004495449.1. NC_015564.1.

Genome annotation databases

EnsemblBacteriaiAEF42649; AEF42649; AS9A_4216.
GeneIDi10636381.
KEGGiasd:AS9A_4216.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002786 Genomic DNA. Translation: AEF42649.1 .
RefSeqi YP_004495449.1. NC_015564.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF42649 ; AEF42649 ; AS9A_4216 .
GeneIDi 10636381.
KEGGi asd:AS9A_4216.

Phylogenomic databases

KOi K01971.
OMAi PDEWRID.

Enzyme and pathway databases

BioCyci ASUB443218:GH9R-4255-MONOMER.

Family and domain databases

InterProi IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view ]
Pfami PF01896. DNA_primase_S. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
    Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
    J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 45089 / DQS3-9A1.

Entry informationi

Entry nameiF6EKA8_AMYSD
AccessioniPrimary (citable) accession number: F6EKA8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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