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F6EK69 (F6EK69_AMYSD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length352 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F6EK69 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 8DA503B3F3D21B5D

FASTA35239,044
        10         20         30         40         50         60 
MQLPVMPPLA PMLAKAAATV PEQAPDASAE PTWLYEPKWD GFRAIVFRDG DDVVIGSRGG 

        70         80         90        100        110        120 
KDLSRYFPEV VTAVRDELPG RCVVDGEIVV PQSTEEGTRL DWEALSARIH PAERRVRQLS 

       130        140        150        160        170        180 
VDTPALFVGF DLLAHHDRSL LDAPFGERRG MLTELAAAEI GPARCHVTRA TNDAAVAQHW 

       190        200        210        220        230        240 
FETFEGAGLD GVIAKRLASR YLPNKRELVK VKHSRTAEAV VIGYRPHKSQ PGVGSVLLGL 

       250        260        270        280        290        300 
YDGDELKMVG GMSAFTNAKR IKIQEDLDGI RSGDRAEGEV SRWRTSADAG FVPVRPERVA 

       310        320        330        340        350 
EVAYDQMEGD RFRHAVRLLR WRPDRDPRSC TYDQLEVPVR YDLADVLEGS AR 

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References

[1]"Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 45089 / DQS3-9A1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002786 Genomic DNA. Translation: AEF42610.1.
RefSeqYP_004495410.1. NC_015564.1.

3D structure databases

ProteinModelPortalF6EK69.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF42610; AEF42610; AS9A_4177.
GeneID10636342.
KEGGasd:AS9A_4177.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAYRPHKSQ.

Enzyme and pathway databases

BioCycASUB443218:GH9R-4216-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6EK69_AMYSD
AccessionPrimary (citable) accession number: F6EK69
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)