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F6EK69

- F6EK69_AMYSD

UniProt

F6EK69 - F6EK69_AMYSD

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Protein
Submitted name:

DNA ligase

Gene
AS9A_4177
Organism
Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciASUB443218:GH9R-4216-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:AS9A_4177Imported
OrganismiAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)Imported
Taxonomic identifieri443218 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeAmycolicicoccus
ProteomesiUP000009235: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6EK69.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiYRPHKSQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6EK69-1 [UniParc]FASTAAdd to Basket

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MQLPVMPPLA PMLAKAAATV PEQAPDASAE PTWLYEPKWD GFRAIVFRDG    50
DDVVIGSRGG KDLSRYFPEV VTAVRDELPG RCVVDGEIVV PQSTEEGTRL 100
DWEALSARIH PAERRVRQLS VDTPALFVGF DLLAHHDRSL LDAPFGERRG 150
MLTELAAAEI GPARCHVTRA TNDAAVAQHW FETFEGAGLD GVIAKRLASR 200
YLPNKRELVK VKHSRTAEAV VIGYRPHKSQ PGVGSVLLGL YDGDELKMVG 250
GMSAFTNAKR IKIQEDLDGI RSGDRAEGEV SRWRTSADAG FVPVRPERVA 300
EVAYDQMEGD RFRHAVRLLR WRPDRDPRSC TYDQLEVPVR YDLADVLEGS 350
AR 352
Length:352
Mass (Da):39,044
Last modified:July 27, 2011 - v1
Checksum:i8DA503B3F3D21B5D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002786 Genomic DNA. Translation: AEF42610.1.
RefSeqiYP_004495410.1. NC_015564.1.

Genome annotation databases

EnsemblBacteriaiAEF42610; AEF42610; AS9A_4177.
GeneIDi10636342.
KEGGiasd:AS9A_4177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002786 Genomic DNA. Translation: AEF42610.1 .
RefSeqi YP_004495410.1. NC_015564.1.

3D structure databases

ProteinModelPortali F6EK69.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEF42610 ; AEF42610 ; AS9A_4177 .
GeneIDi 10636342.
KEGGi asd:AS9A_4177.

Phylogenomic databases

KOi K01971.
OMAi YRPHKSQ.

Enzyme and pathway databases

BioCyci ASUB443218:GH9R-4216-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
    Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
    J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 45089 / DQS3-9A1.

Entry informationi

Entry nameiF6EK69_AMYSD
AccessioniPrimary (citable) accession number: F6EK69
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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