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Protein

Glutamate decarboxylase

Gene

AS9A_2484

Organism
Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciASUB443218:GH9R-2516-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:AS9A_2484Imported
OrganismiAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)Imported
Taxonomic identifieri443218 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeAmycolicicoccus
ProteomesiUP000009235 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiDPDLVWD.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F6EFK2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGLKCRGKF LRHSARIFRL VYAPDMPLSQ PSGGHHSHRR SVSVNPIFTR
60 70 80 90 100
EPLEIPHDRF PRDQLDPDTA YQIVHDELML DGNARLNLAT FVSTWMEPQA
110 120 130 140 150
RTLMAECFDK NMIDKDEYPG TAELEQRCVR MLANLWHAPP ADAPTGCSTT
160 170 180 190 200
GSSEACMLAG LALKRRWQQA GGEKRGRPNL VMGVNVQICW DKFATYWDVE
210 220 230 240 250
PRLVPMEGDR YHLTADEAVK YCDENTIGVV AILGSTYDGS YEPVADICRA
260 270 280 290 300
LDDLQSRTGW NIPVHVDGAS GAMIAPFCDP DLEWDFRLDR VASINTSGHK
310 320 330 340 350
YGLVYPGVGW VVWRDAEALP DELVFRVNYL GGEMPTFALN FSRPGAHVAA
360 370 380 390 400
QYYNFIRLGF DGYRRVQRTC RDVAMHLSSA IAELGPFELV TDGSELPVFA
410 420 430 440 450
FTVRNDVTGY SAFDVSAALR ESGWLVPAYT FPANREDLAA LRVVVRNGFS
460 470 480 490
HDLAERFLDE VKRVLPRLHR QDSPQRGSEA ASFSHSAKRT
Length:490
Mass (Da):54,902
Last modified:July 27, 2011 - v1
Checksum:i92698F7A6A76323A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002786 Genomic DNA. Translation: AEF40931.1.
RefSeqiYP_004493731.1. NC_015564.1.

Genome annotation databases

EnsemblBacteriaiAEF40931; AEF40931; AS9A_2484.
KEGGiasd:AS9A_2484.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002786 Genomic DNA. Translation: AEF40931.1.
RefSeqiYP_004493731.1. NC_015564.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF40931; AEF40931; AS9A_2484.
KEGGiasd:AS9A_2484.

Phylogenomic databases

KOiK01580.
OMAiDPDLVWD.

Enzyme and pathway databases

BioCyciASUB443218:GH9R-2516-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
    Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
    J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 45089 / DQS3-9A1Imported.

Entry informationi

Entry nameiF6EFK2_AMYSD
AccessioniPrimary (citable) accession number: F6EFK2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 1, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.