F6EFK2 (F6EFK2_AMYSD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glutamate decarboxylase EMBL AEF40931.1

Gene names

Ordered Locus Names:

AS9A_2484 EMBL AEF40931.1

Organism

Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) [Complete proteome] [HAMAP]

Taxonomic identifier

443218 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Amycolicicoccus › Amycolicicoccus subflavus

Protein attributes

Sequence length	490 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6EFK2 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 92698F7A6A76323A	FASTA	490	54,902
	10 20 30 40 50 60 MAGLKCRGKF LRHSARIFRL VYAPDMPLSQ PSGGHHSHRR SVSVNPIFTR EPLEIPHDRF 70 80 90 100 110 120 PRDQLDPDTA YQIVHDELML DGNARLNLAT FVSTWMEPQA RTLMAECFDK NMIDKDEYPG 130 140 150 160 170 180 TAELEQRCVR MLANLWHAPP ADAPTGCSTT GSSEACMLAG LALKRRWQQA GGEKRGRPNL 190 200 210 220 230 240 VMGVNVQICW DKFATYWDVE PRLVPMEGDR YHLTADEAVK YCDENTIGVV AILGSTYDGS 250 260 270 280 290 300 YEPVADICRA LDDLQSRTGW NIPVHVDGAS GAMIAPFCDP DLEWDFRLDR VASINTSGHK 310 320 330 340 350 360 YGLVYPGVGW VVWRDAEALP DELVFRVNYL GGEMPTFALN FSRPGAHVAA QYYNFIRLGF 370 380 390 400 410 420 DGYRRVQRTC RDVAMHLSSA IAELGPFELV TDGSELPVFA FTVRNDVTGY SAFDVSAALR 430 440 450 460 470 480 ESGWLVPAYT FPANREDLAA LRVVVRNGFS HDLAERFLDE VKRVLPRLHR QDSPQRGSEA 490 ASFSHSAKRT

References

[1]

"Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil." Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L. J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 45089 / DQS3-9A1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002786 Genomic DNA. Translation: AEF40931.1.
RefSeq	YP_004493731.1. NC_015564.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEF40931; AEF40931; AS9A_2484.
GeneID	10634656.
KEGG	asd:AS9A_2484.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Enzyme and pathway databases
BioCyc	ASUB443218:GH9R-2516-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F6EFK2_AMYSD

Accession

Primary (citable) accession number: F6EFK2

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)