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F6EF02 (F6EF02_AMYSD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:AS9A_3701 EMBL AEF42139.1
OrganismAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) [Complete proteome] [HAMAP] EMBL AEF42139.1
Taxonomic identifier443218 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeAmycolicicoccus

Protein attributes

Sequence length605 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL AEF42139.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6EF02 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: C3E6FC90B10A74B4

FASTA60569,245
        10         20         30         40         50         60 
MAIPTHERRP DAALGLEGVP HTGEEMTDDG HLVEPQANEF AHAREAKREP EWYKTAVFYE 

        70         80         90        100        110        120 
VLVRAFHDSN NDGTGDMRGL VDKLDYLQWL GVDCLWLPPF YASPLRDGGY DISDFRAVLP 

       130        140        150        160        170        180 
EFGTVDDFVY LLEHAHRRNI RIITDLVLNH TSDAHPWFQE SRNHPDGPYG DFYVWSDTDT 

       190        200        210        220        230        240 
GYPDARIIFV DTESSNWTYD PVRGQFYWHR FFSHQPDLNY ENPEVGEAMI DVLRFWLDLG 

       250        260        270        280        290        300 
IDGFRLDAVP YLFEEEGTNC ENLPRTHEFL KHCRKVVDDE FPGRVLLAEA NQWPSDVVAY 

       310        320        330        340        350        360 
FGDPAVGGDE CHMAFHFPLM PRIFMAVRRE SRYPISEILA QTPPIPAGAQ WGIFLRNHDE 

       370        380        390        400        410        420 
LTLEMVTDDE RDYMYSEYAT DPRMKANIGI RRRLAPLLDN DINQMELFTA MLLSLPGSPV 

       430        440        450        460        470        480 
LYYGDEIGMG DNIWLGDRDA VRTPMQWTPD RNAGFSTCNP GRMYLPPIAD PVYGYQSVNV 

       490        500        510        520        530        540 
EAQLNNASSL LYWTRRMLEI RRQHHAFGLG EFIELGSSNP SVLAYLRHYN DPADGDDLVL 

       550        560        570        580        590        600 
CVNNLSRFPQ PVELDLSRYA GRQPTELTGG VRFPVIGELP YLLTLPGHGF YWFQVTDAVE 


GGDAQ 

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References

[1]"Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil-polluted soil."
Cai M., Chen W.M., Nie Y., Chi C.Q., Wang Y.N., Tang Y.Q., Li G.Y., Wu X.L.
J. Bacteriol. 193:4538-4539(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 45089 / DQS3-9A1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002786 Genomic DNA. Translation: AEF42139.1.
RefSeqYP_004494939.1. NC_015564.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF42139; AEF42139; AS9A_3701.
GeneID10635868.
KEGGasd:AS9A_3701.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.
OMARMKANIG.

Enzyme and pathway databases

BioCycASUB443218:GH9R-3739-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6EF02_AMYSD
AccessionPrimary (citable) accession number: F6EF02
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)