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F6E938 (F6E938_SINMK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL AEG55487.1
Gene names
Ordered Locus Names:Sinme_3785 EMBL AEG55487.1
OrganismSinorhizobium meliloti (strain AK83) [Complete proteome] [HAMAP] EMBL AEG55487.1
Taxonomic identifier693982 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL AEG55487.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F6E938 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 8AB13C1A20143001

FASTA41844,849
        10         20         30         40         50         60 
MIRITYRIET PGDVEVLAKK IASDQSTGTF VPVPGETEEL KARVAARVLA IRHLEPADRA 

        70         80         90        100        110        120 
SWPDEAGSAT RFNRADAEIA FPLDAVGTDL SALMTIAIGG VYSIKGMTGI RIVDMKLPPE 

       130        140        150        160        170        180 
FAAAHPGPQF GVVGSRRLTG VEGRPIIGTI VKPALGLRPE ETAVLVGELL SSGVDFIKDD 

       190        200        210        220        230        240 
EKLMSPAYSP LSARIAAIMP RILDHEQKTG KKVMYAFGIS HTDPDEMMRN HDLVVAAGGN 

       250        260        270        280        290        300 
AAVVNINSVG MGGVAFLRKR SGLVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLLGVDQF 

       310        320        330        340        350        360 
QINGIRVKYW EPDESFVKSF EAVSTPLFTK DDCPLPVVGS GQWGGQAPET YARTGHTTDL 

       370        380        390        400        410 
LYLCGGGIVS HPGGPGAGVR AVRQAWEAAV AGIPLADYAR DHPELAQSLE KFADGKGA 

« Hide

References

[1]"Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti."
US DOE Joint Genome Institute
Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., Detter C. expand/collapse author list , Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., Biondi E.G.
BMC Genomics 12:235-235(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AK83.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002782 Genomic DNA. Translation: AEG55487.1.
RefSeqYP_004556367.1. NC_015596.1.

3D structure databases

ProteinModelPortalF6E938.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG55487; AEG55487; Sinme_3785.
GeneID10729825.
KEGGsmk:Sinme_3785.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.
OMAFECAGDP.

Enzyme and pathway databases

BioCycSMEL693982:GJDT-3850-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6E938_SINMK
AccessionPrimary (citable) accession number: F6E938
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: January 22, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)