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F6E6D6 (F6E6D6_SINMK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.16 EMBL AEG55764.1
Gene names
Ordered Locus Names:Sinme_4068 EMBL AEG55764.1
OrganismSinorhizobium meliloti (strain AK83) [Complete proteome] [HAMAP] EMBL AEG55764.1
Taxonomic identifier693982 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F6E6D6 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: E24ACF2E58CC8D28

FASTA54461,063
        10         20         30         40         50         60 
MKEAPWFSSS VIYGIDVRRF SDGNGDGIGD FIGLKERVSY LHYLGIDCVW LSPFFRSPFA 

        70         80         90        100        110        120 
DNGYDVSDYY SIDPVLGTLD DFLDFLHAAG EQGIRVVVDL VANHTSSEHP WFQAARRDAR 

       130        140        150        160        170        180 
CRFRDYYVWS ESPPPVAPDN KTAFPGEESS VWTYDDLAQA YYFHKFRHFQ PELNIANPAV 

       190        200        210        220        230        240 
RDELLRVVDY WLTLGVDGFR VDAAPFVIGE TGIEHADPRD PQGFLREMRK LVDGRRQDGL 

       250        260        270        280        290        300 
LLGEADLAPE KLRSYFGDGK LDLLFNFVLC AAFAASLAGQ KADPIGQALS IMPEPPPHRG 

       310        320        330        340        350        360 
WANFLRNLDE LNLDRLPEDI REETFAAFAP DEEMRIYGRG IRRRLAPMLD GNRARIELAF 

       370        380        390        400        410        420 
SLLLSSPGVP LVLYGDEIGL GEDLSRPGRE PVRVPMQWNA GTNAGFSTAQ RAKLVQPPVT 

       430        440        450        460        470        480 
DGPFSFKRVN VEAQREDPGS LLNRVRAMIL ARRRHELFNR GRPVMLHTGD PALFALAYSD 

       490        500        510        520        530        540 
GTELFVVLHN LSDGKRRAEL ELPGAIDARL NDILGEREVE LSGQRLAIGL GPFGYVWLHS 


GKKD 

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References

[1]"Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti."
US DOE Joint Genome Institute
Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., Detter C. expand/collapse author list , Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., Biondi E.G.
BMC Genomics 12:235-235(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AK83.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002782 Genomic DNA. Translation: AEG55764.1.
RefSeqYP_004556644.1. NC_015596.1.

3D structure databases

ProteinModelPortalF6E6D6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG55764; AEG55764; Sinme_4068.
GeneID10730108.
KEGGsmk:Sinme_4068.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.
OMAEIGWGDF.

Enzyme and pathway databases

BioCycSMEL693982:GJDT-4133-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameF6E6D6_SINMK
AccessionPrimary (citable) accession number: F6E6D6
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)