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F6E2R3

- F6E2R3_SINMK

UniProt

F6E2R3 - F6E2R3_SINMK

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Sinme_2962
Organism
Sinorhizobium meliloti (strain AK83)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMEL693982:GJDT-3008-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Sinme_2962Imported
OrganismiSinorhizobium meliloti (strain AK83)Imported
Taxonomic identifieri693982 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000008705: Chromosome 1

Structurei

3D structure databases

ProteinModelPortaliF6E2R3.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiRVWLWSR.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6E2R3-1 [UniParc]FASTAAdd to Basket

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MKAFAELLDR LVLTPQRNAK IRLLVDYFRG APDPSRGYAL AAIAGTLSLN    50
TVKPALIRDL LLERMDDVLF HYSYDYVGDL AETVSLAWEP PPDVALQDIP 100
LGEVVERLQR AGRSEVRSLV RDFLDRLDTS GRFALLKLAT GGLRIGVSAR 150
LAKQALAEMG GKEVSEIETL WHGLEPPYLP LFLWLTGEAE MPVLKTPAVF 200
HSVMLATAVG DGDLDGLDPA DFAAEWKWDG IRVQLANVGG ARRLYSRSGD 250
EISSAFPEII EAADITGVID GELLVGGTMR SNRATGTFAD LQQRLNRKTV 300
SRKLMDEYPA FIRAYDILFS GERDIRPEPF RVRREALSSL IEAASPQHFD 350
LSPLVGFSSW KELDELRSSP PDPVIEGVML KRLDSPYMAG RAKGPWFKWK 400
RAPFNIDAVL MYAQRGHGKR SSYYSDFTFG VWAEGEDGAS LVPVGKAYFG 450
FTDAELEVLD RFVRDNTVER FGPVRAVRAE PDSGFVVEVA FEGLNRSTRH 500
KSGVAMRFPR IARLRPDKLP RDADRLETLQ AMMGTQR 537
Length:537
Mass (Da):59,849
Last modified:July 27, 2011 - v1
Checksum:iBD706BE3A0E12AD5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002781 Genomic DNA. Translation: AEG54669.1.
RefSeqiYP_004550283.1. NC_015590.1.

Genome annotation databases

EnsemblBacteriaiAEG54669; AEG54669; Sinme_2962.
GeneIDi10727566.
KEGGismk:Sinme_2962.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002781 Genomic DNA. Translation: AEG54669.1 .
RefSeqi YP_004550283.1. NC_015590.1.

3D structure databases

ProteinModelPortali F6E2R3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG54669 ; AEG54669 ; Sinme_2962 .
GeneIDi 10727566.
KEGGi smk:Sinme_2962.

Phylogenomic databases

KOi K01971.
OMAi RVWLWSR.

Enzyme and pathway databases

BioCyci SMEL693982:GJDT-3008-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AK83.

Entry informationi

Entry nameiF6E2R3_SINMK
AccessioniPrimary (citable) accession number: F6E2R3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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