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F6E2R3 (F6E2R3_SINMK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sinme_2962 EMBL AEG54669.1
OrganismSinorhizobium meliloti (strain AK83) [Complete proteome] [HAMAP] EMBL AEG54669.1
Taxonomic identifier693982 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length537 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F6E2R3 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: BD706BE3A0E12AD5

FASTA53759,849
        10         20         30         40         50         60 
MKAFAELLDR LVLTPQRNAK IRLLVDYFRG APDPSRGYAL AAIAGTLSLN TVKPALIRDL 

        70         80         90        100        110        120 
LLERMDDVLF HYSYDYVGDL AETVSLAWEP PPDVALQDIP LGEVVERLQR AGRSEVRSLV 

       130        140        150        160        170        180 
RDFLDRLDTS GRFALLKLAT GGLRIGVSAR LAKQALAEMG GKEVSEIETL WHGLEPPYLP 

       190        200        210        220        230        240 
LFLWLTGEAE MPVLKTPAVF HSVMLATAVG DGDLDGLDPA DFAAEWKWDG IRVQLANVGG 

       250        260        270        280        290        300 
ARRLYSRSGD EISSAFPEII EAADITGVID GELLVGGTMR SNRATGTFAD LQQRLNRKTV 

       310        320        330        340        350        360 
SRKLMDEYPA FIRAYDILFS GERDIRPEPF RVRREALSSL IEAASPQHFD LSPLVGFSSW 

       370        380        390        400        410        420 
KELDELRSSP PDPVIEGVML KRLDSPYMAG RAKGPWFKWK RAPFNIDAVL MYAQRGHGKR 

       430        440        450        460        470        480 
SSYYSDFTFG VWAEGEDGAS LVPVGKAYFG FTDAELEVLD RFVRDNTVER FGPVRAVRAE 

       490        500        510        520        530 
PDSGFVVEVA FEGLNRSTRH KSGVAMRFPR IARLRPDKLP RDADRLETLQ AMMGTQR 

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References

[1]"Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti."
US DOE Joint Genome Institute
Galardini M., Mengoni A., Brilli M., Pini F., Fioravanti A., Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Land M., Hauser L., Woyke T., Mikhailova N., Ivanova N., Daligault H., Bruce D., Detter C. expand/collapse author list , Tapia R., Han C., Teshima H., Mocali S., Bazzicalupo M., Biondi E.G.
BMC Genomics 12:235-235(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AK83.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002781 Genomic DNA. Translation: AEG54669.1.
RefSeqYP_004550283.1. NC_015590.1.

3D structure databases

ProteinModelPortalF6E2R3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG54669; AEG54669; Sinme_2962.
GeneID10727566.
KEGGsmk:Sinme_2962.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGQPYPFF.

Enzyme and pathway databases

BioCycSMEL693982:GJDT-3008-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6E2R3_SINMK
AccessionPrimary (citable) accession number: F6E2R3
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)