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F6E2R3

- F6E2R3_SINMK

UniProt

F6E2R3 - F6E2R3_SINMK

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Sinme_2962

Organism
Sinorhizobium meliloti (strain AK83)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSMEL693982:GJDT-3008-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Sinme_2962Imported
    OrganismiSinorhizobium meliloti (strain AK83)Imported
    Taxonomic identifieri693982 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000008705: Chromosome 1

    Structurei

    3D structure databases

    ProteinModelPortaliF6E2R3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiRVWLWSR.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6E2R3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFAELLDR LVLTPQRNAK IRLLVDYFRG APDPSRGYAL AAIAGTLSLN    50
    TVKPALIRDL LLERMDDVLF HYSYDYVGDL AETVSLAWEP PPDVALQDIP 100
    LGEVVERLQR AGRSEVRSLV RDFLDRLDTS GRFALLKLAT GGLRIGVSAR 150
    LAKQALAEMG GKEVSEIETL WHGLEPPYLP LFLWLTGEAE MPVLKTPAVF 200
    HSVMLATAVG DGDLDGLDPA DFAAEWKWDG IRVQLANVGG ARRLYSRSGD 250
    EISSAFPEII EAADITGVID GELLVGGTMR SNRATGTFAD LQQRLNRKTV 300
    SRKLMDEYPA FIRAYDILFS GERDIRPEPF RVRREALSSL IEAASPQHFD 350
    LSPLVGFSSW KELDELRSSP PDPVIEGVML KRLDSPYMAG RAKGPWFKWK 400
    RAPFNIDAVL MYAQRGHGKR SSYYSDFTFG VWAEGEDGAS LVPVGKAYFG 450
    FTDAELEVLD RFVRDNTVER FGPVRAVRAE PDSGFVVEVA FEGLNRSTRH 500
    KSGVAMRFPR IARLRPDKLP RDADRLETLQ AMMGTQR 537
    Length:537
    Mass (Da):59,849
    Last modified:July 27, 2011 - v1
    Checksum:iBD706BE3A0E12AD5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002781 Genomic DNA. Translation: AEG54669.1.
    RefSeqiYP_004550283.1. NC_015590.1.

    Genome annotation databases

    EnsemblBacteriaiAEG54669; AEG54669; Sinme_2962.
    GeneIDi10727566.
    KEGGismk:Sinme_2962.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002781 Genomic DNA. Translation: AEG54669.1 .
    RefSeqi YP_004550283.1. NC_015590.1.

    3D structure databases

    ProteinModelPortali F6E2R3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEG54669 ; AEG54669 ; Sinme_2962 .
    GeneIDi 10727566.
    KEGGi smk:Sinme_2962.

    Phylogenomic databases

    KOi K01971.
    OMAi RVWLWSR.

    Enzyme and pathway databases

    BioCyci SMEL693982:GJDT-3008-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AK83Imported.

    Entry informationi

    Entry nameiF6E2R3_SINMK
    AccessioniPrimary (citable) accession number: F6E2R3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3