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Protein

Superoxide dismutase [Cu-Zn]

Gene

Desru_2439

Organism
Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandCopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciDRUM696281:GCNL-2431-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Desru_2439Imported
OrganismiDesulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL)Imported
Taxonomic identifieri696281 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfotomaculum
Proteomesi
  • UP000009234 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6DN89.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 167Sod_CuInterPro annotationAdd BLAST134

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04565.
OMAiGKSVIIH.
OrthoDBiPOG091H05EB.

Family and domain databases

CDDicd00305. Cu-Zn_Superoxide_Dismutase. 1 hit.
Gene3Di2.60.40.200. 1 hit.
InterProiView protein in InterPro
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
PfamiView protein in Pfam
PF00080. Sod_Cu. 1 hit.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiView protein in PROSITE
PS00332. SOD_CU_ZN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F6DN89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKGYCDKNK GTIEETTRDM ACAQILGGPL APRLTGLVYF TAVPGGTWVA
60 70 80 90 100
VEVCGLPPYQ PAQNCGQPIG PHGFHIHENC NCEVGDVNDP FMGAGEHWNP
110 120 130 140 150
TNQPHGNHVG DFPVLFSNNG YARMAFFTNK FKPCQVVGRS IIIHQNPDDY
160 170
RTQPSGNSGK RLACGIIVNC
Length:170
Mass (Da):18,444
Last modified:July 27, 2011 - v1
Checksum:iA37F8DBA7BB33946
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002780 Genomic DNA. Translation: AEG60678.1.

Genome annotation databases

EnsemblBacteriaiAEG60678; AEG60678; Desru_2439.
KEGGidru:Desru_2439.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiF6DN89_DESRL
AccessioniPrimary (citable) accession number: F6DN89
Entry historyiIntegrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: July 5, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported