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F6DBE8 (F6DBE8_THICA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Cytochrome b RuleBase RU003385
Gene names
Ordered Locus Names:Thicy_0483 EMBL AEG31256.1
OrganismThioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) [Complete proteome] [HAMAP]
Taxonomic identifier717773 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Thiotrichales › Piscirickettsiaceae › Thioalkalimicrobium ›

Protein attributes

Sequence length414 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis By similarity. RuleBase RU003385

Cofactor

Binds 2 heme groups non-covalently By similarity. RuleBase RU003385

Subunit structure

The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein By similarity. RuleBase RU003385

Sequence similarities

Belongs to the cytochrome b family. RuleBase RU003385

Sequences

Sequence LengthMass (Da)Tools
F6DBE8 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: A166F1BBDD21DDA0

FASTA41447,088
        10         20         30         40         50         60 
MSELQTQKTN EPGGLLKWVD DRYPLIDTWN KHVAEYYAPK NFNFWYFFGS FALFTLVIMI 

        70         80         90        100        110        120 
VSGIWLTMSY KPDAAYAFNS VEYIMRDVEF GWLIRYIHTT GASAFFIVIY LHMTRALLYG 

       130        140        150        160        170        180 
SFKQPRELVW LIGMTIFVVL MAEAFFGYML PWGQMSYWGA QVIIGLFSTI PFIGPDLATW 

       190        200        210        220        230        240 
IRGDYIISDA TLNRFFALHV IALPLVLVIL VFMHIVALHK VGSNNPDGVD IKKHKDENGI 

       250        260        270        280        290        300 
PLDGIAFHPY YTVKDSFGAT LFLIAFALIV FYAPEGGGHF IEAPNFIPAD PLVTPENIVP 

       310        320        330        340        350        360 
VWYFTPFYAI LRAIPEPFLG VLAMGLSIAV LFAMPWLDRC KVRSIRYRGN SYKILLTMLF 

       370        380        390        400        410 
ISFIVLGVLG GLPSTPLYTK LAQVFTILYF AFFILLPFTS AHEKTKPVPE RVTS

« Hide

References

[1]"Complete sequence of Thioalkalimicrobium cyclicum ALM1."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Davenport K., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Kappler U., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14477 / JCM 11371 / ALM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002776 Genomic DNA. Translation: AEG31256.1.
RefSeqYP_004536735.1. NC_015581.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG31256; AEG31256; Thicy_0483.
GeneID10719283.
KEGGtcy:Thicy_0483.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00412.

Family and domain databases

InterProIPR016175. Cyt_b/b6.
IPR005798. Cyt_b/b6_C.
IPR005797. Cyt_b/b6_N.
IPR016174. Di-haem_cyt_TM.
[Graphical view]
PANTHERPTHR19271. PTHR19271. 1 hit.
PfamPF00032. Cytochrom_B_C. 1 hit.
PF13631. Cytochrom_B_N_2. 1 hit.
[Graphical view]
SUPFAMSSF81648. Cytochrome_b/b6_C. 1 hit.
SSF81342. Transmembr_di-haem_cytochrome. 1 hit.
PROSITEPS51003. CYTB_CTER. 1 hit.
PS51002. CYTB_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6DBE8_THICA
AccessionPrimary (citable) accession number: F6DBE8
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 1, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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