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F6D952 (F6D952_THICA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.62 EMBL AEG30883.1
Gene names
Ordered Locus Names:Thicy_0107 EMBL AEG30883.1
OrganismThioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) [Complete proteome] [HAMAP] EMBL AEG30883.1
Taxonomic identifier717773 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaThiotrichalesPiscirickettsiaceaeThioalkalimicrobium

Protein attributes

Sequence length443 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
F6D952 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 6FA9053932AC917A

FASTA44348,479
        10         20         30         40         50         60 
MNNFLFDQQH IWHPYNRLPA RQPALAASST QGCTITLDDG RQLLDAMSSW WSAIHGYNHP 

        70         80         90        100        110        120 
TIIAAASEQL QKMPHIMFGG FSHQPATELA QALIDISPPS LTHTFFADSG SIAVEVALKM 

       130        140        150        160        170        180 
ALQYWKSIGQ PRKSRFIALQ HAYHGDTFGA MSVCDPVDGM HHLFADNLMP NLFAKAPPIC 

       190        200        210        220        230        240 
HHPSEPLDNQ ACLASLAQIL EQHHHEIAAF IFEPIVQGAG GMRFYSADYL KEAAALCRHY 

       250        260        270        280        290        300 
DVLLIADEIA TGLGRTGKLF ACEWADIEPD ILTLGKGLSA GMISLAAVLC NERIRAGISQ 

       310        320        330        340        350        360 
AAPGLLMHGP TFMANPLACR IAHASVKLLN DYDWQTAVTQ LQHIFSQAWQ GLAHPDIVGI 

       370        380        390        400        410        420 
RCLGGVAVIE LNRDDLAGLI QEFALEEGVW LRPFGKLVYS MPAYTMTATE AQQIAQVMAS 

       430        440 
AVMKALIAAD KQDTALKQQR PFV 

« Hide

References

[1]"Complete sequence of Thioalkalimicrobium cyclicum ALM1."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Davenport K., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Kappler U., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14477 / JCM 11371 / ALM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002776 Genomic DNA. Translation: AEG30883.1.
RefSeqYP_004536362.1. NC_015581.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG30883; AEG30883; Thicy_0107.
GeneID10718897.
KEGGtcy:Thicy_0107.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00833.
OMAPWQERRG.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProIPR005814. Aminotrans_3.
IPR005815. BioA.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00508. bioA. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF6D952_THICA
AccessionPrimary (citable) accession number: F6D952
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)