F6D952 (F6D952_THICA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase EMBL AEG30883.1
EC=2.6.1.62 EMBL AEG30883.1

Gene names

Ordered Locus Names:

Thicy_0107 EMBL AEG30883.1

Organism

Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) [Complete proteome] [HAMAP]

Taxonomic identifier

717773 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Thiotrichales › Piscirickettsiaceae › Thioalkalimicrobium › Thioalkalimicrobium cyclicum

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL AEG30883.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	biotin biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	adenosylmethionine-8-amino-7-oxononanoate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6D952 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 6FA9053932AC917A	FASTA	443	48,479
	10 20 30 40 50 60 MNNFLFDQQH IWHPYNRLPA RQPALAASST QGCTITLDDG RQLLDAMSSW WSAIHGYNHP 70 80 90 100 110 120 TIIAAASEQL QKMPHIMFGG FSHQPATELA QALIDISPPS LTHTFFADSG SIAVEVALKM 130 140 150 160 170 180 ALQYWKSIGQ PRKSRFIALQ HAYHGDTFGA MSVCDPVDGM HHLFADNLMP NLFAKAPPIC 190 200 210 220 230 240 HHPSEPLDNQ ACLASLAQIL EQHHHEIAAF IFEPIVQGAG GMRFYSADYL KEAAALCRHY 250 260 270 280 290 300 DVLLIADEIA TGLGRTGKLF ACEWADIEPD ILTLGKGLSA GMISLAAVLC NERIRAGISQ 310 320 330 340 350 360 AAPGLLMHGP TFMANPLACR IAHASVKLLN DYDWQTAVTQ LQHIFSQAWQ GLAHPDIVGI 370 380 390 400 410 420 RCLGGVAVIE LNRDDLAGLI QEFALEEGVW LRPFGKLVYS MPAYTMTATE AQQIAQVMAS 430 440 AVMKALIAAD KQDTALKQQR PFV

References

[1]

"Complete sequence of Thioalkalimicrobium cyclicum ALM1." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Davenport K., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Kappler U., Woyke T. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 14477 / JCM 11371 / ALM1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002776 Genomic DNA. Translation: AEG30883.1.
RefSeq	YP_004536362.1. NC_015581.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEG30883; AEG30883; Thicy_0107.
GeneID	10718897.
KEGG	tcy:Thicy_0107.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K00833.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR005814. Aminotrans_3. IPR005815. BioA. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit. PTHR11986:SF8. PTHR11986:SF8. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00508. bioA. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F6D952_THICA

Accession

Primary (citable) accession number: F6D952

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)