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F6D5P5

- F6D5P5_METPW

UniProt

F6D5P5 - F6D5P5_METPW

Protein
Submitted name:

ATP dependent DNA ligase

Gene

MSWAN_1210

Organism
Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMSP868131:GHW8-1239-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:MSWAN_1210Imported
    OrganismiMethanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1)Imported
    Taxonomic identifieri868131 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium
    ProteomesiUP000009231: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF6D5P5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiATYNIFD.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F6D5P5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIEPMLCKLT GPEVQLTGTW ISEPKYDGER IIASRKGDKI SLWTRRHIQV    50
    SKKFPEITQA LTKNMNDDNW IVDGEITVHG GFRDLLKRNV ENKFKIHILS 100
    KKIPATYNIF DIIQWKGEDL ISKPLIERKK VLIDAVYMDD RMRIVPFLKV 150
    DNQTVRKHFL EYLKDGFEGA VIKNAFSKYE PGKRSGQWIK IKREDTVDVY 200
    VVGATKSTGS IPFGALILKK DGRYFGKVGT GFTDQQRKDI LKILEKNRGP 250
    RGIMLPPEIE SEVLLTSKPL LAEIKIQEII KGSPRSPVWV RFRWE 295
    Length:295
    Mass (Da):34,023
    Last modified:July 27, 2011 - v1
    Checksum:iA33C3FF9848D1C99
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002772 Genomic DNA. Translation: AEG18227.1.
    RefSeqiWP_013825728.1. NC_015574.1.
    YP_004520028.1. NC_015574.1.

    Genome annotation databases

    EnsemblBacteriaiAEG18227; AEG18227; MSWAN_1210.
    GeneIDi10668715.
    KEGGimew:MSWAN_1210.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002772 Genomic DNA. Translation: AEG18227.1 .
    RefSeqi WP_013825728.1. NC_015574.1.
    YP_004520028.1. NC_015574.1.

    3D structure databases

    ProteinModelPortali F6D5P5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEG18227 ; AEG18227 ; MSWAN_1210 .
    GeneIDi 10668715.
    KEGGi mew:MSWAN_1210.

    Phylogenomic databases

    KOi K01971.
    OMAi ATYNIFD.

    Enzyme and pathway databases

    BioCyci MSP868131:GHW8-1239-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Methanobacterium sp. SWAN-1."
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Cadillo-Quiroz H., Imachi H.
      , Zinder S., Liu W., Woyke T.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 25820 / JCM 18151 / SWAN1Imported.

    Entry informationi

    Entry nameiF6D5P5_METPW
    AccessioniPrimary (citable) accession number: F6D5P5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 27, 2011
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3