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F6D5P5

- F6D5P5_METPW

UniProt

F6D5P5 - F6D5P5_METPW

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
MSWAN_1210
Organism
Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMSP868131:GHW8-1239-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MSWAN_1210Imported
OrganismiMethanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1)Imported
Taxonomic identifieri868131 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium
ProteomesiUP000009231: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF6D5P5.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiATYNIFD.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F6D5P5-1 [UniParc]FASTAAdd to Basket

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MIEPMLCKLT GPEVQLTGTW ISEPKYDGER IIASRKGDKI SLWTRRHIQV    50
SKKFPEITQA LTKNMNDDNW IVDGEITVHG GFRDLLKRNV ENKFKIHILS 100
KKIPATYNIF DIIQWKGEDL ISKPLIERKK VLIDAVYMDD RMRIVPFLKV 150
DNQTVRKHFL EYLKDGFEGA VIKNAFSKYE PGKRSGQWIK IKREDTVDVY 200
VVGATKSTGS IPFGALILKK DGRYFGKVGT GFTDQQRKDI LKILEKNRGP 250
RGIMLPPEIE SEVLLTSKPL LAEIKIQEII KGSPRSPVWV RFRWE 295
Length:295
Mass (Da):34,023
Last modified:July 27, 2011 - v1
Checksum:iA33C3FF9848D1C99
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002772 Genomic DNA. Translation: AEG18227.1.
RefSeqiWP_013825728.1. NC_015574.1.
YP_004520028.1. NC_015574.1.

Genome annotation databases

EnsemblBacteriaiAEG18227; AEG18227; MSWAN_1210.
GeneIDi10668715.
KEGGimew:MSWAN_1210.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002772 Genomic DNA. Translation: AEG18227.1 .
RefSeqi WP_013825728.1. NC_015574.1.
YP_004520028.1. NC_015574.1.

3D structure databases

ProteinModelPortali F6D5P5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEG18227 ; AEG18227 ; MSWAN_1210 .
GeneIDi 10668715.
KEGGi mew:MSWAN_1210.

Phylogenomic databases

KOi K01971.
OMAi ATYNIFD.

Enzyme and pathway databases

BioCyci MSP868131:GHW8-1239-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Methanobacterium sp. SWAN-1."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Cadillo-Quiroz H., Imachi H.
    , Zinder S., Liu W., Woyke T.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 25820 / JCM 18151 / SWAN1.

Entry informationi

Entry nameiF6D5P5_METPW
AccessioniPrimary (citable) accession number: F6D5P5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: September 3, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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