F6D1I6 (F6D1I6_METSW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL AEG17214.1
EC=4.1.1.15 EMBL AEG17214.1

Gene names

Ordered Locus Names:

MSWAN_0168

Organism

Methanobacterium sp. (strain SWAN-1) [Complete proteome] [HAMAP] EMBL AEG17214.1

Taxonomic identifier

868131 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanobacterium

Protein attributes

Sequence length	455 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL AEG17214.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F6D1I6 [UniParc]. Last modified July 27, 2011. Version 1. Checksum: 64815717533155A8	FASTA	455	51,972
	10 20 30 40 50 60 MKRSEKELTT TYGSRYFAES VPKYVMPEDG MPARAAYQLI HDELNLDGNP ALNLASFVTT 70 80 90 100 110 120 WMEPEADKLI MESIDKNFVD NDEYPQTEKI HERVINMLAR LFNAPKECHS VGTGTIGSSE 130 140 150 160 170 180 AIMLGLLAHK WTWKKRRQAE GKPFGKPNIV MGADVHTVWE KFALYFDVEL KLIPLERDTY 190 200 210 220 230 240 TVTVDQVAEE IDENTICVGA VLGTTFTGQM DPINEINQLL IDIKKEKGWD IPIHVDGASG 250 260 270 280 290 300 GFVAPFLYPD LEWDFKLQQV KSINVSGHKY GLVYPGVGWL IFRDKKDLPE ELIFKVNYLG 310 320 330 340 350 360 GLMPNYSLNF SKGSSTIIAQ YYNFIRLGKS GYREIMENMI DNSKYLARKL EESGKFDVIN 370 380 390 400 410 420 KDIMFPLVTM SLKNSDFTVF HLSEKLRQKG WIIPAYTLPK NAEDVAVMRM VIKENFGREM 430 440 450 VDMLLDDLIE AYHTLEEEDT EKEGFETGEN PSLLY

References

[1]

"Complete sequence of Methanobacterium sp. SWAN-1." Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Cadillo-Quiroz H., Imachi H. , Zinder S., Liu W., Woyke T. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SWAN-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002772 Genomic DNA. Translation: AEG17214.1.
RefSeq	YP_004519015.1. NC_015574.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEG17214; AEG17214; MSWAN_0168.
GeneID	10667646.
KEGG	mew:MSWAN_0168.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Enzyme and pathway databases
BioCyc	MSP868131:GHW8-170-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F6D1I6_METSW

Accession

Primary (citable) accession number: F6D1I6

Entry history

Integrated into UniProtKB/TrEMBL:	July 27, 2011
Last sequence update:	July 27, 2011
Last modified:	May 29, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)