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Protein
Submitted name:

Glutamate decarboxylase

Gene

MSWAN_0168

Organism
Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMSP868131:GHW8-170-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Ordered Locus Names:MSWAN_0168Imported
OrganismiMethanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1)Imported
Taxonomic identifieri868131 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium
ProteomesiUP000009231 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi868131.MSWAN_0168.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiDPDLVWD.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

F6D1I6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRSEKELTT TYGSRYFAES VPKYVMPEDG MPARAAYQLI HDELNLDGNP
60 70 80 90 100
ALNLASFVTT WMEPEADKLI MESIDKNFVD NDEYPQTEKI HERVINMLAR
110 120 130 140 150
LFNAPKECHS VGTGTIGSSE AIMLGLLAHK WTWKKRRQAE GKPFGKPNIV
160 170 180 190 200
MGADVHTVWE KFALYFDVEL KLIPLERDTY TVTVDQVAEE IDENTICVGA
210 220 230 240 250
VLGTTFTGQM DPINEINQLL IDIKKEKGWD IPIHVDGASG GFVAPFLYPD
260 270 280 290 300
LEWDFKLQQV KSINVSGHKY GLVYPGVGWL IFRDKKDLPE ELIFKVNYLG
310 320 330 340 350
GLMPNYSLNF SKGSSTIIAQ YYNFIRLGKS GYREIMENMI DNSKYLARKL
360 370 380 390 400
EESGKFDVIN KDIMFPLVTM SLKNSDFTVF HLSEKLRQKG WIIPAYTLPK
410 420 430 440 450
NAEDVAVMRM VIKENFGREM VDMLLDDLIE AYHTLEEEDT EKEGFETGEN

PSLLY
Length:455
Mass (Da):51,972
Last modified:July 27, 2011 - v1
Checksum:i64815717533155A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002772 Genomic DNA. Translation: AEG17214.1.
RefSeqiWP_013824716.1. NC_015574.1.
YP_004519015.1. NC_015574.1.

Genome annotation databases

EnsemblBacteriaiAEG17214; AEG17214; MSWAN_0168.
GeneIDi10667646.
KEGGimew:MSWAN_0168.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002772 Genomic DNA. Translation: AEG17214.1.
RefSeqiWP_013824716.1. NC_015574.1.
YP_004519015.1. NC_015574.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi868131.MSWAN_0168.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEG17214; AEG17214; MSWAN_0168.
GeneIDi10667646.
KEGGimew:MSWAN_0168.

Phylogenomic databases

KOiK01580.
OMAiDPDLVWD.

Enzyme and pathway databases

BioCyciMSP868131:GHW8-170-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Methanobacterium sp. SWAN-1."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Cadillo-Quiroz H., Imachi H.
    , Zinder S., Liu W., Woyke T.
    Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 25820 / JCM 18151 / SWAN1Imported.

Entry informationi

Entry nameiF6D1I6_METPW
AccessioniPrimary (citable) accession number: F6D1I6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 24, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.