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F6D1I6 (F6D1I6_METSW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL AEG17214.1
Gene names
Ordered Locus Names:MSWAN_0168 EMBL AEG17214.1
OrganismMethanobacterium sp. (strain SWAN-1) [Complete proteome] [HAMAP] EMBL AEG17214.1
Taxonomic identifier868131 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanobacteriaceaeMethanobacterium

Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
F6D1I6 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: 64815717533155A8

FASTA45551,972
        10         20         30         40         50         60 
MKRSEKELTT TYGSRYFAES VPKYVMPEDG MPARAAYQLI HDELNLDGNP ALNLASFVTT 

        70         80         90        100        110        120 
WMEPEADKLI MESIDKNFVD NDEYPQTEKI HERVINMLAR LFNAPKECHS VGTGTIGSSE 

       130        140        150        160        170        180 
AIMLGLLAHK WTWKKRRQAE GKPFGKPNIV MGADVHTVWE KFALYFDVEL KLIPLERDTY 

       190        200        210        220        230        240 
TVTVDQVAEE IDENTICVGA VLGTTFTGQM DPINEINQLL IDIKKEKGWD IPIHVDGASG 

       250        260        270        280        290        300 
GFVAPFLYPD LEWDFKLQQV KSINVSGHKY GLVYPGVGWL IFRDKKDLPE ELIFKVNYLG 

       310        320        330        340        350        360 
GLMPNYSLNF SKGSSTIIAQ YYNFIRLGKS GYREIMENMI DNSKYLARKL EESGKFDVIN 

       370        380        390        400        410        420 
KDIMFPLVTM SLKNSDFTVF HLSEKLRQKG WIIPAYTLPK NAEDVAVMRM VIKENFGREM 

       430        440        450 
VDMLLDDLIE AYHTLEEEDT EKEGFETGEN PSLLY 

« Hide

References

[1]"Complete sequence of Methanobacterium sp. SWAN-1."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Cadillo-Quiroz H., Imachi H. expand/collapse author list , Zinder S., Liu W., Woyke T.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SWAN-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002772 Genomic DNA. Translation: AEG17214.1.
RefSeqYP_004519015.1. NC_015574.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEG17214; AEG17214; MSWAN_0168.
GeneID10667646.
KEGGmew:MSWAN_0168.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.
OMAMEPECGK.

Enzyme and pathway databases

BioCycMSP868131:GHW8-170-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6D1I6_METSW
AccessionPrimary (citable) accession number: F6D1I6
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)