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Protein
Submitted name:

DNA ligase (ATP)

Gene

Mar181_1619

Organism
Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Mar181_1619Imported
OrganismiMarinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181)Imported
Taxonomic identifieri491952 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesMarinomonas
Proteomesi
  • UP000009230 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500333852021 – 279Sequence analysisAdd BLAST259

Interactioni

Protein-protein interaction databases

STRINGi491952.Mar181_1619.

Structurei

3D structure databases

ProteinModelPortaliF6CZC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 196DNA_LIGASE_A3InterPro annotationAdd BLAST161
Domaini211 – 275DNA_ligase_OB_2InterPro annotationAdd BLAST65

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
KOiK10747.
OrthoDBiPOG091H05UG.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

F6CZC1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWIKCCLIGL VLSLPALGVA QTEVQLATQF SDDIHVQDYF VSEKYDGIRA
60 70 80 90 100
IWTGSKLITR KGNNIHAPKW FTEKLPNIWL DGELWTQHND FANILSIVRK
110 120 130 140 150
KQPIDQEWRQ IKYMIFDAPD QERSMTFEQR YARYKRILEH LELPHVLPVQ
160 170 180 190 200
QFTVVDLPEL YDQLNEYVAS GAEGLMLHRK LAVFESGRTD NLLKLKPYVE
210 220 230 240 250
KEAKVVAVLA GQGKYEHKMG SVLVEMPSGV RFKIGSGFSD QERENPPAVG
260 270
STIIFKHSGF TQRGIPRFAV FQRLRYATY
Length:279
Mass (Da):32,160
Last modified:July 27, 2011 - v1
Checksum:iA9D45F06933DFD7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002771 Genomic DNA. Translation: AEF54658.1.
RefSeqiWP_013796133.1. NC_015559.1.

Genome annotation databases

EnsemblBacteriaiAEF54658; AEF54658; Mar181_1619.
KEGGimpc:Mar181_1619.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002771 Genomic DNA. Translation: AEF54658.1.
RefSeqiWP_013796133.1. NC_015559.1.

3D structure databases

ProteinModelPortaliF6CZC1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi491952.Mar181_1619.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEF54658; AEF54658; Mar181_1619.
KEGGimpc:Mar181_1619.

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
KOiK10747.
OrthoDBiPOG091H05UG.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiF6CZC1_MARPP
AccessioniPrimary (citable) accession number: F6CZC1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: November 2, 2016
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.