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F6CZC1 (F6CZC1_MARPP) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length279 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AEF54658.1
   Molecular functionLigase EMBL AEF54658.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential EMBL AEF54658.1
Chain20 – 279260 Potential EMBL AEF54658.1
PRO_5000751367

Sequences

Sequence LengthMass (Da)Tools
F6CZC1 [UniParc].

Last modified July 27, 2011. Version 1.
Checksum: A9D45F06933DFD7B

FASTA27932,160
        10         20         30         40         50         60 
MWIKCCLIGL VLSLPALGVA QTEVQLATQF SDDIHVQDYF VSEKYDGIRA IWTGSKLITR 

        70         80         90        100        110        120 
KGNNIHAPKW FTEKLPNIWL DGELWTQHND FANILSIVRK KQPIDQEWRQ IKYMIFDAPD 

       130        140        150        160        170        180 
QERSMTFEQR YARYKRILEH LELPHVLPVQ QFTVVDLPEL YDQLNEYVAS GAEGLMLHRK 

       190        200        210        220        230        240 
LAVFESGRTD NLLKLKPYVE KEAKVVAVLA GQGKYEHKMG SVLVEMPSGV RFKIGSGFSD 

       250        260        270 
QERENPPAVG STIIFKHSGF TQRGIPRFAV FQRLRYATY 

« Hide

References

[1]"Complete genome sequence of Marinomonas posidonica type strain (IVIA-Po-181(T))."
Lucas-Elio P., Goodwin L., Woyke T., Pitluck S., Nolan M., Kyrpides N.C., Detter J.C., Copeland A., Lu M., Bruce D., Detter C., Tapia R., Han S., Land M.L., Ivanova N., Mikhailova N., Johnston A.W., Sanchez-Amat A.
Stand. Genomic Sci. 7:31-43(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CECT 7376 / NCIMB 14433 / IVIA-Po-181.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002771 Genomic DNA. Translation: AEF54658.1.
RefSeqYP_004481577.1. NC_015559.1.

3D structure databases

ProteinModelPortalF6CZC1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEF54658; AEF54658; Mar181_1619.
GeneID10646473.
KEGGmpc:Mar181_1619.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycMPOS491952:GI6N-1672-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF6CZC1_MARPP
AccessionPrimary (citable) accession number: F6CZC1
Entry history
Integrated into UniProtKB/TrEMBL: July 27, 2011
Last sequence update: July 27, 2011
Last modified: June 11, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)